Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BV11031_RS18385 | Genome accession | NZ_CP026362 |
| Coordinates | 3474361..3476793 (-) | Length | 810 a.a. |
| NCBI ID | WP_010327704.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain DSM 11031 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3469361..3481793
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV11031_RS18360 (BV11031_18330) | ispF | 3469410..3469886 (-) | 477 | WP_010327709.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| BV11031_RS18365 (BV11031_18335) | ispD | 3469879..3470577 (-) | 699 | WP_010327708.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| BV11031_RS18370 (BV11031_18340) | - | 3470592..3471692 (-) | 1101 | WP_010327707.1 | PIN/TRAM domain-containing protein | - |
| BV11031_RS18375 (BV11031_18345) | disA | 3471807..3472889 (-) | 1083 | WP_010327706.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| BV11031_RS18380 (BV11031_18350) | radA | 3472893..3474269 (-) | 1377 | WP_010327705.1 | DNA repair protein RadA | Machinery gene |
| BV11031_RS18385 (BV11031_18355) | clpC | 3474361..3476793 (-) | 2433 | WP_010327704.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| BV11031_RS18390 (BV11031_18360) | - | 3476790..3477881 (-) | 1092 | WP_010327703.1 | protein arginine kinase | - |
| BV11031_RS18395 (BV11031_18365) | mcsA | 3477881..3478438 (-) | 558 | WP_010327702.1 | protein-arginine kinase activator protein McsA | - |
| BV11031_RS18400 (BV11031_18370) | ctsR | 3478452..3478916 (-) | 465 | WP_010327701.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90047.52 Da Isoelectric Point: 6.0253
>NTDB_id=268856 BV11031_RS18385 WP_010327704.1 3474361..3476793(-) (clpC) [Bacillus vallismortis strain DSM 11031]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
ASWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
ASWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=268856 BV11031_RS18385 WP_010327704.1 3474361..3476793(-) (clpC) [Bacillus vallismortis strain DSM 11031]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTATTGGCGCTTGCACAGGAAGAAGCACTTCGATTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGACAGGAAATGTCCCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGTCATTCGTATGTTGGAACAGAACA
TATTCTTCTTGGGTTGATTCGCGAAGGAGAAGGTGTTGCTGCAAGAGTTCTGAATAATCTTGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTCCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGGGACTTAACTGCTATTGCGAAGGAAGACAGCCTAGATCCTGTAATCGGGAGAAGCAA
GGAAATTCAGCGCGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTACTCATTGGTGAACCAGGTGTAGGTA
AAACGGCAATCGCGGAAGGGTTGGCACAGCAAATTATTAATAACGAGGTTCCAGAAATCTTACGTGATAAACGTGTGATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAGAAAGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTTTATTCATCGATGAACTCCATACCTTAATCGGAGCGGGTGGAGCAGAGGGTGCCA
TTGATGCGTCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATCGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCATTGGAACGCCGTTTTCAGCCGATCCAGGTTGATCAGCCATCTGCAGATGAAAG
TATTCAAATTTTACAAGGTCTGCGTGACAGATATGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCCGATAGATATATTTCTGACCGCTTCCTTCCAGATAAAGCAATTGACTTGATTGACGAAGCGGGCTCG
AAGGTTAGACTCCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCCGTCCAAAGCCAAGAGTTTGAAAAAGCGGCTTCCTTGCGTGATACTGAGCAGCGCTTGCGCGAGCAAGTAG
AGGATACGAAAAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
GCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACGGAAACAGATAAGCTTCTCAATATGGAGAGCATTCTTCA
CTCCCGTGTCATCGGCCAGGATGAAGCGGTTGTCGCCGTTGCAAAAGCAGTCAGACGCGCAAGAGCAGGGTTAAAAGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTGGGGAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCTATTTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCGGAATACATGGAAAAACACTCTACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATATGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAAAAAGCACACCCTGATGTCTTCAATATTCTGCTGCAAGTTCTTGAAGATGGGCGATTGACG
GATTCTAAAGGACGTACAGTCGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGGGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAATGTTCAAGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAACTGA
AACGCGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACACCTGACT
GAAATCGTTTCATTAATGTCTGATCAATTGACGAAACGCTTGAAAGAGCAGGACCTTTCTATTGAATTGACAGATGCTGC
AAAAGCAAAAGTAGCGGAAGAGGGTGTTGATCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTAAGAGGAAATATTCATAAAGGACAGCACATCGTTCTTGATGTAGAAGACGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTATTGGCGCTTGCACAGGAAGAAGCACTTCGATTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGGATTGCTGCTAAAGCTCTACAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGACAGGAAATGTCCCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTCGGTCATTCGTATGTTGGAACAGAACA
TATTCTTCTTGGGTTGATTCGCGAAGGAGAAGGTGTTGCTGCAAGAGTTCTGAATAATCTTGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTCCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGGGACTTAACTGCTATTGCGAAGGAAGACAGCCTAGATCCTGTAATCGGGAGAAGCAA
GGAAATTCAGCGCGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTACTCATTGGTGAACCAGGTGTAGGTA
AAACGGCAATCGCGGAAGGGTTGGCACAGCAAATTATTAATAACGAGGTTCCAGAAATCTTACGTGATAAACGTGTGATG
ACATTAGACATGGGAACAGTTGTTGCCGGCACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAGAAAGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTTTATTCATCGATGAACTCCATACCTTAATCGGAGCGGGTGGAGCAGAGGGTGCCA
TTGATGCGTCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATCGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCATTGGAACGCCGTTTTCAGCCGATCCAGGTTGATCAGCCATCTGCAGATGAAAG
TATTCAAATTTTACAAGGTCTGCGTGACAGATATGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCCGATAGATATATTTCTGACCGCTTCCTTCCAGATAAAGCAATTGACTTGATTGACGAAGCGGGCTCG
AAGGTTAGACTCCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCCGTCCAAAGCCAAGAGTTTGAAAAAGCGGCTTCCTTGCGTGATACTGAGCAGCGCTTGCGCGAGCAAGTAG
AGGATACGAAAAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
GCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACGGAAACAGATAAGCTTCTCAATATGGAGAGCATTCTTCA
CTCCCGTGTCATCGGCCAGGATGAAGCGGTTGTCGCCGTTGCAAAAGCAGTCAGACGCGCAAGAGCAGGGTTAAAAGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTGGGGAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCTATTTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCGGAATACATGGAAAAACACTCTACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATATGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAAAAAGCACACCCTGATGTCTTCAATATTCTGCTGCAAGTTCTTGAAGATGGGCGATTGACG
GATTCTAAAGGACGTACAGTCGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGGGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAATGTTCAAGATGAGACGCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAACTGA
AACGCGCGTTCAGACCGGAGTTTATCAACCGGATTGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACACCTGACT
GAAATCGTTTCATTAATGTCTGATCAATTGACGAAACGCTTGAAAGAGCAGGACCTTTCTATTGAATTGACAGATGCTGC
AAAAGCAAAAGTAGCGGAAGAGGGTGTTGATCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTAAGAGGAAATATTCATAAAGGACAGCACATCGTTCTTGATGTAGAAGACGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.259 |
100 |
0.993 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.374 |
99.012 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.481 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.238 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.994 |
99.877 |
0.449 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus mutans UA159 |
53.005 |
80.123 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
52.08 |
80.123 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
52.08 |
80.123 |
0.417 |