Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   BV11031_RS16665 Genome accession   NZ_CP026362
Coordinates   3164156..3164554 (+) Length   132 a.a.
NCBI ID   WP_010330230.1    Uniprot ID   -
Organism   Bacillus vallismortis strain DSM 11031     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3159156..3169554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS16640 (BV11031_16615) hxlR 3159887..3160249 (-) 363 WP_010330235.1 transcriptional activator HxlR -
  BV11031_RS16645 (BV11031_16620) hxlA 3160479..3161111 (+) 633 WP_010330234.1 3-hexulose-6-phosphate synthase -
  BV11031_RS16650 (BV11031_16625) hxlB 3161116..3161673 (+) 558 WP_010330233.1 6-phospho-3-hexuloisomerase -
  BV11031_RS16655 (BV11031_16630) tlpC 3161785..3163506 (+) 1722 WP_010330232.1 methyl-accepting chemotaxis protein TlpC -
  BV11031_RS16660 (BV11031_16635) nucA/comI 3163683..3164132 (+) 450 WP_128568242.1 DNA-entry nuclease Machinery gene
  BV11031_RS16665 (BV11031_16640) nin/comJ 3164156..3164554 (+) 399 WP_010330230.1 DNA-entry nuclease inhibitor Regulator
  BV11031_RS23040 - 3164591..3164694 (-) 104 Protein_3257 hypothetical protein -
  BV11031_RS16670 (BV11031_16645) - 3164832..3165560 (-) 729 WP_010330229.1 AAA family ATPase -
  BV11031_RS16675 (BV11031_16650) - 3165572..3165913 (-) 342 WP_010330228.1 DUF3147 family protein -
  BV11031_RS16680 (BV11031_16655) - 3165901..3166323 (-) 423 WP_010330227.1 MarR family transcriptional regulator -
  BV11031_RS16685 (BV11031_16660) - 3166459..3166791 (-) 333 WP_010330226.1 YckD family protein -
  BV11031_RS16690 (BV11031_16665) - 3166874..3167329 (-) 456 WP_010330225.1 RDD family protein -
  BV11031_RS16695 (BV11031_16670) - 3167342..3168478 (-) 1137 WP_010330224.1 zinc-dependent alcohol dehydrogenase -
  BV11031_RS16700 (BV11031_16675) - 3168646..3169509 (+) 864 WP_010330765.1 transporter substrate-binding domain-containing protein -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14898.88 Da        Isoelectric Point: 4.5610

>NTDB_id=268853 BV11031_RS16665 WP_010330230.1 3164156..3164554(+) (nin/comJ) [Bacillus vallismortis strain DSM 11031]
MIKSWKPQELSISYHQFTVFQQDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYKKKVTVPF
QVTENGIEIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=268853 BV11031_RS16665 WP_010330230.1 3164156..3164554(+) (nin/comJ) [Bacillus vallismortis strain DSM 11031]
TTGATCAAGTCATGGAAGCCACAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAACAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTTGCTGCGGCGGACGGAGCGATTTCATTTGAAGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGACTGAACAGTTCAGAAACTGTAAACTCCTACAAAAAGAAAGTGACTGTTCCTTTT
CAAGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

94.697

100

0.947


Multiple sequence alignment