Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BV11031_RS13915 Genome accession   NZ_CP026362
Coordinates   2573924..2574715 (-) Length   263 a.a.
NCBI ID   WP_129550777.1    Uniprot ID   -
Organism   Bacillus vallismortis strain DSM 11031     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2568924..2579715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS13880 (BV11031_13860) - 2569759..2570619 (-) 861 WP_010330863.1 alpha/beta hydrolase -
  BV11031_RS13885 (BV11031_13865) - 2570606..2570938 (-) 333 WP_026014554.1 SdpI family protein -
  BV11031_RS13890 (BV11031_13870) - 2571024..2571542 (-) 519 WP_010330865.1 SH3 domain-containing protein -
  BV11031_RS13895 (BV11031_13875) - 2571686..2571955 (-) 270 WP_010330866.1 YfhJ family protein -
  BV11031_RS13900 (BV11031_13880) - 2572080..2572232 (+) 153 WP_010330867.1 small, acid-soluble spore protein K -
  BV11031_RS13905 (BV11031_13885) - 2572266..2573459 (-) 1194 WP_129550776.1 MFS transporter -
  BV11031_RS13910 (BV11031_13890) - 2573596..2573916 (-) 321 WP_010330868.1 YfhH family protein -
  BV11031_RS13915 (BV11031_13895) recX 2573924..2574715 (-) 792 WP_129550777.1 recombination regulator RecX Regulator
  BV11031_RS13920 (BV11031_13900) - 2574804..2575715 (+) 912 WP_010330869.1 TIGR01777 family oxidoreductase -
  BV11031_RS13925 (BV11031_13905) - 2575769..2575879 (+) 111 WP_003223230.1 YfhE family protein -
  BV11031_RS13930 (BV11031_13910) - 2575946..2576137 (+) 192 WP_003223225.1 YfhD family protein -
  BV11031_RS13935 (BV11031_13915) - 2576177..2576761 (-) 585 WP_010330870.1 nitroreductase -
  BV11031_RS13940 (BV11031_13920) - 2576848..2577729 (-) 882 WP_010330871.1 PhzF family phenazine biosynthesis isomerase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30820.00 Da        Isoelectric Point: 6.6646

>NTDB_id=268847 BV11031_RS13915 WP_129550777.1 2573924..2574715(-) (recX) [Bacillus vallismortis strain DSM 11031]
MPFITKISAQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKESLSSFSFEDQTRE
AVKHVEKLLKKDKKCSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=268847 BV11031_RS13915 WP_129550777.1 2573924..2574715(-) (recX) [Bacillus vallismortis strain DSM 11031]
ATGCCATTTATTACAAAAATATCTGCACAAAAAAAGAATACGGAACGCTTCAATATCTTTCTCGATGATAAATACGCCTT
CAGTGTGGACGCGGACGTGCTCGTAAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTTGACATTATTGAGATTC
AATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCAACAAAAGAGGTA
GAGGACCACTTAAAGAAAAAAGAAACCTCAGCGCCTGTCATTGCAGAAGTCATCCATAAGCTCAACGACTACAAGTACTT
AAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATCGACGACGATACTATTAAGGAATCGCTGAGTTCCTTTTCCTTTGAGGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTTAAAAAGGATAAAAAATGTTCCACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGTTTCTCATTTGATGTCATCAGCGCCGCGCTCGAGCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGTCTTCACGCCGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.578

100

0.966

Multiple sequence alignment