Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BV11031_RS05870 Genome accession   NZ_CP026362
Coordinates   1075947..1076750 (+) Length   267 a.a.
NCBI ID   WP_010328297.1    Uniprot ID   -
Organism   Bacillus vallismortis strain DSM 11031     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1070947..1081750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS05850 (BV11031_05825) - 1071061..1071906 (+) 846 WP_010328293.1 TlyA family RNA methyltransferase -
  BV11031_RS05855 (BV11031_05830) argR 1072003..1072452 (+) 450 WP_010328294.1 arginine repressor ArgR -
  BV11031_RS05860 (BV11031_05835) recN 1072487..1074217 (+) 1731 WP_010328295.1 DNA repair protein RecN Machinery gene
  BV11031_RS05865 (BV11031_05840) spoIVB 1074392..1075672 (+) 1281 WP_010328296.1 SpoIVB peptidase -
  BV11031_RS05870 (BV11031_05845) spo0A 1075947..1076750 (+) 804 WP_010328297.1 sporulation transcription factor Spo0A Regulator
  BV11031_RS05880 (BV11031_05855) - 1077280..1078398 (-) 1119 WP_010328300.1 NADH-dependent flavin oxidoreductase -
  BV11031_RS05885 (BV11031_05860) - 1078866..1079597 (+) 732 WP_010328301.1 glycerophosphodiester phosphodiesterase -
  BV11031_RS05890 (BV11031_05865) - 1079726..1080907 (+) 1182 WP_010328302.1 acetyl-CoA C-acetyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29675.19 Da        Isoelectric Point: 6.3913

>NTDB_id=268822 BV11031_RS05870 WP_010328297.1 1075947..1076750(+) (spo0A) [Bacillus vallismortis strain DSM 11031]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVIERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSAQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=268822 BV11031_RS05870 WP_010328297.1 1075947..1076750(+) (spo0A) [Bacillus vallismortis strain DSM 11031]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTCATCGGTGTTGCTTATAACGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTGGATATTATTATGCCGCATTTGGACGGACTTGCGGTTATAGAGCGGCTGCGGGAATCAGACCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
GAAACCGTTTGATATGGAAAACCTTGTCGGGCATATCCGCCAGGTCAGCGGGAATGCAAGCAGCGTGACGCATCGCGCGC
CGTCATCACAAAGCAGCATTATACGCAGCGCCCAGCCAGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCACATATTAAGGGCTATCTCTATCTGCGCGAAGCCATCTCAATGGTATACAATGACAT
TGAATTGCTCGGCAGCATTACTAAAGTTCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCAATCCGCCATGCGATTGAAGTCGCATGGAGCAGAGGGAACATTGATTCGATTTCCTCGTTGTTCGGCTATACAGTC
AGCATGACAAAAGCCAAACCTACCAACTCAGAGTTCATTGCGATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAG

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.251

100

0.993

Multiple sequence alignment