Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BV11031_RS05860 Genome accession   NZ_CP026362
Coordinates   1072487..1074217 (+) Length   576 a.a.
NCBI ID   WP_010328295.1    Uniprot ID   A0AAP3CM02
Organism   Bacillus vallismortis strain DSM 11031     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1067487..1079217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS05835 (BV11031_05810) - 1067848..1068102 (+) 255 WP_003226409.1 exodeoxyribonuclease VII small subunit -
  BV11031_RS05840 (BV11031_05815) - 1068092..1068982 (+) 891 WP_010328291.1 polyprenyl synthetase family protein -
  BV11031_RS05845 (BV11031_05820) dxs 1069163..1071064 (+) 1902 WP_010328292.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BV11031_RS05850 (BV11031_05825) - 1071061..1071906 (+) 846 WP_010328293.1 TlyA family RNA methyltransferase -
  BV11031_RS05855 (BV11031_05830) argR 1072003..1072452 (+) 450 WP_010328294.1 arginine repressor ArgR -
  BV11031_RS05860 (BV11031_05835) recN 1072487..1074217 (+) 1731 WP_010328295.1 DNA repair protein RecN Machinery gene
  BV11031_RS05865 (BV11031_05840) spoIVB 1074392..1075672 (+) 1281 WP_010328296.1 SpoIVB peptidase -
  BV11031_RS05870 (BV11031_05845) spo0A 1075947..1076750 (+) 804 WP_010328297.1 sporulation transcription factor Spo0A Regulator
  BV11031_RS05880 (BV11031_05855) - 1077280..1078398 (-) 1119 WP_010328300.1 NADH-dependent flavin oxidoreductase -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64724.44 Da        Isoelectric Point: 4.6916

>NTDB_id=268821 BV11031_RS05860 WP_010328295.1 1072487..1074217(+) (recN) [Bacillus vallismortis strain DSM 11031]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVFEVC
AEQGIDVSDEMIIMRRDISTSGKSVCRINGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEAESALQ
AYQEGYQRYMKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQFSNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLKKLSENVSNSYYLLEDATFQMRNMLDELEYDPERLNDIETRLNEIKQLKRKYGASV
EDILEYASKIEEEIDQIENRDSHLQSVKKELDSVGKDVAVEAENVSKIRKTWAKKLADEIHRELKSLYMEKTTFDTEFKV
RTAPRNEEAPIVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAMKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTHVKPLSKQEKVTEIGRMIAGVEVTDVTKR
HAKELLRQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=268821 BV11031_RS05860 WP_010328295.1 1072487..1074217(+) (recN) [Bacillus vallismortis strain DSM 11031]
TTGTTAGCTGAACTATCCATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGAGGGCTCACGGTTTT
AACAGGAGAAACCGGAGCCGGCAAGTCCATCATCATAGATGCCATTTCTCTATTAGTCGGAGGCCGCGGCTCATCTGAAT
TTGTCAGATATGGAGAGGCAAAAGCCGAGCTTGAAGGCTTGTTTCTATTGGAGAGCGGCCATCCTGTTTTTGAAGTATGC
GCTGAGCAGGGAATTGACGTTTCAGACGAAATGATCATCATGAGGAGGGACATCAGCACGAGCGGAAAAAGCGTTTGCCG
CATTAATGGCAAGCTTGTTACGATTGCCTCGCTAAGAGAGATCGGCAGGCTTTTATTAGATATTCACGGGCAGCACGATA
ACCAGCTGTTAATGGAAGACGAAAATCATCTCCAGCTGTTGGACAAGTTTGCCGGAGCCGAAGCGGAAAGCGCGCTTCAA
GCGTATCAGGAAGGGTATCAACGATATATGAAGCTGCTTAAAAAGCTAAAGCAGCTTTCTGAAAGCGAACAGGAAATGGC
CCACCGTCTTGATCTCATTCAATTTCAGCTTGAAGAAATTGAATCGGCCAAGCTCGAGCTTAATGAAGATGAACAGCTTC
AGGAAGAGCGCCAGCAATTTTCAAATTTTGAAAAGATCTATGAATCGCTGCAAAATGCATATAATGCGCTTCGAAGCGAG
CAGGGCGGACTGGATTGGGTCGGAATGGCTTCAGCGCAGCTTGAAGATATATCCGATATTAACGAACCGCTGAAAAAGCT
GTCTGAAAATGTGTCGAACTCCTACTATCTTTTGGAGGACGCTACATTTCAGATGAGAAATATGCTGGATGAGCTTGAAT
ATGATCCGGAACGCCTGAATGATATTGAGACGCGTCTTAATGAAATCAAACAGCTGAAACGAAAATACGGTGCGTCTGTT
GAGGATATTTTGGAATACGCTTCTAAAATTGAAGAAGAGATTGACCAAATAGAAAATAGAGACAGCCACCTTCAAAGTGT
GAAGAAGGAGCTTGATTCAGTCGGCAAAGATGTCGCAGTGGAAGCGGAAAATGTTTCAAAAATCCGCAAAACATGGGCGA
AAAAGCTGGCTGATGAGATTCATCGGGAATTAAAAAGCCTCTATATGGAAAAAACAACTTTTGATACGGAATTTAAGGTC
AGAACAGCGCCCCGAAATGAAGAGGCGCCAATTGTAAACGGCCAGCCTGTCCAACTGACTGAACAAGGGATTGATTTGGT
GAAGTTTTTAATTTCAACCAATACAGGCGAACCGCTCAAATCTCTTTCGAAAGTCGCTTCCGGAGGAGAGCTGTCACGAG
TGATGCTTGCTATGAAAAGCATTTTTTCCTCCCAACAGGATGTGACGTCGATTATATTCGATGAGGTTGATACCGGAGTA
AGCGGCAGAGTCGCACAGGCAATCGCTGAGAAGATCCATAAAGTATCAATAGGCTCGCAAGTGCTGTGCATTACACATTT
GCCTCAGGTGGCCGCCATGGCCGATACGCACCTTTATATTGCGAAGGAGTTAAAAGACGGCAGAACGACAACACATGTCA
AGCCGCTGTCTAAGCAGGAAAAGGTAACAGAAATCGGACGCATGATTGCCGGCGTCGAAGTAACAGACGTAACGAAACGC
CATGCAAAAGAACTTTTAAGACAAGCGGATCAAGTCAAAACAACCGGGTAG

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

95.66

100

0.957

Multiple sequence alignment