Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   BV11031_RS01510 Genome accession   NZ_CP026362
Coordinates   294732..295376 (+) Length   214 a.a.
NCBI ID   WP_010329906.1    Uniprot ID   A0AAP3FU71
Organism   Bacillus vallismortis strain DSM 11031     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 289732..300376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS01480 (BV11031_01485) - 290133..290498 (-) 366 WP_010329911.1 hypothetical protein -
  BV11031_RS01485 - 290611..290778 (-) 168 WP_128568229.1 hypothetical protein -
  BV11031_RS01490 (BV11031_01490) degQ 290958..291098 (+) 141 WP_010329910.1 degradation enzyme regulation protein DegQ Regulator
  BV11031_RS01495 (BV11031_01495) - 291229..292122 (+) 894 WP_240467595.1 polyprenyl synthetase family protein -
  BV11031_RS01500 (BV11031_01500) comX 292137..292313 (+) 177 WP_010329908.1 competence pheromone ComX -
  BV11031_RS01505 (BV11031_01505) comP 292333..294651 (+) 2319 WP_010329907.1 sensor histidine kinase Regulator
  BV11031_RS01510 (BV11031_01510) comA 294732..295376 (+) 645 WP_010329906.1 two-component system response regulator ComA Regulator
  BV11031_RS01515 (BV11031_01515) - 295395..295775 (+) 381 WP_010329905.1 hotdog fold thioesterase -
  BV11031_RS01520 (BV11031_01520) mnhG 295815..296189 (-) 375 WP_010329904.1 monovalent cation/H(+) antiporter subunit G -
  BV11031_RS01525 (BV11031_01525) - 296173..296457 (-) 285 WP_010329903.1 Na(+)/H(+) antiporter subunit F1 -
  BV11031_RS01530 (BV11031_01530) - 296457..296933 (-) 477 WP_010329902.1 Na+/H+ antiporter subunit E -
  BV11031_RS01535 (BV11031_01535) - 296939..298423 (-) 1485 WP_010329901.1 Na+/H+ antiporter subunit D -
  BV11031_RS01540 (BV11031_01540) - 298416..298757 (-) 342 WP_010329900.1 Na(+)/H(+) antiporter subunit C -
  BV11031_RS01545 (BV11031_01545) - 298757..299188 (-) 432 WP_010329899.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24120.57 Da        Isoelectric Point: 4.7737

>NTDB_id=268799 BV11031_RS01510 WP_010329906.1 294732..295376(+) (comA) [Bacillus vallismortis strain DSM 11031]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSDKFIKQHDFSSYDLILMDLNLGGEINGMELSKQILQESPRCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=268799 BV11031_RS01510 WP_010329906.1 294732..295376(+) (comA) [Bacillus vallismortis strain DSM 11031]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATCT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGACAAGTTTATTAAGCAGCATGATTTCTCGTCATATGATCTCATCTTAA
TGGATTTGAATTTAGGCGGCGAGATCAATGGGATGGAGCTTTCTAAACAAATTTTACAAGAGAGTCCTCGTTGTAAGATT
ATTGTGTATACCGGTTATGAGGTCGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCGCTTCATTTGAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCCCGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

97.664

100

0.977

Multiple sequence alignment