Detailed information
Bioinformatically predicted
Overview
| Name | cqsS | Type | Regulator |
| Locus tag | C1N50_RS21505 | Genome accession | NZ_CP026322 |
| Coordinates | 1061556..1063601 (-) | Length | 681 a.a. |
| NCBI ID | WP_103414785.1 | Uniprot ID | - |
| Organism | Vibrio campbellii strain BoB-53 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1056556..1068601
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1N50_RS21490 (C1N50_21480) | - | 1057608..1058594 (+) | 987 | WP_103414331.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| C1N50_RS21495 (C1N50_21485) | ylqF | 1058915..1059859 (+) | 945 | WP_005426767.1 | ribosome biogenesis GTPase YlqF | - |
| C1N50_RS21500 (C1N50_21490) | cqsA | 1060148..1061449 (+) | 1302 | WP_265093577.1 | alpha-hydroxyketone-type quorum-sensing autoinducer synthase | Regulator |
| C1N50_RS21505 (C1N50_21495) | cqsS | 1061556..1063601 (-) | 2046 | WP_103414785.1 | response regulator | Regulator |
| C1N50_RS21510 (C1N50_21500) | - | 1063906..1064523 (+) | 618 | WP_038891692.1 | HAD family phosphatase | - |
| C1N50_RS21515 (C1N50_21505) | - | 1064863..1065411 (-) | 549 | WP_005426812.1 | GNAT family N-acetyltransferase | - |
| C1N50_RS21520 (C1N50_21510) | - | 1065705..1066829 (+) | 1125 | WP_045369066.1 | fatty acid desaturase | - |
| C1N50_RS21525 (C1N50_21515) | dcuC | 1067212..1068579 (+) | 1368 | WP_012129600.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
Sequence
Protein
Download Length: 681 a.a. Molecular weight: 77868.72 Da Isoelectric Point: 5.3994
>NTDB_id=268152 C1N50_RS21505 WP_103414785.1 1061556..1063601(-) (cqsS) [Vibrio campbellii strain BoB-53]
MDAIRKVYQYAEPNLTLVGWMGFIGFPIYYIVWEFMFPQPYENLPLRILCSVLFFGIIYRNRTPFEWRRFLPAYYQVVTT
LCLPCFFFYMLLMNNWSNVWVMSFMSAIFLHILLVHITSVMFAQTFAGIGLATFFAWVVQGFHLELTMDWTHVPIFLFIY
LFGNLFYFRNQVEHEAKVSIAKSFGAGIAHEMRNPLSGLLTSIDVIQSVLPNPKEGKKEQYTLSDEDVTLLREVSSDAMK
IIHSGNETIDLLLTSIDENRVSRSTFKKHSAQSVVESAIESFSYKRSTDRFAISLDVRSEFDFLGSDTLLKYVMYNLFKN
AFHHRSSEDFHIHVTMYSDEFANQIVVTDNGSGIAPEVLQSIFQDFYTTGKSGNYGLGLPFCKKVMRSFGGDIRCQSEVG
EWSQFTMTFPTIGSSAVKEIKSELTKLKTILFVSEQNILVSKVTDIARFMGFELTVLDVPAVLKKKEYEFEFDLILIDME
SLDARGSHIDKVESLLSFTEARIVYMFEHHPIQRARSVSFEPIWVETQAWLLNTRATIDRLLYDANYVVPSMPAKPLDST
NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQTEDGLQAINALNENDVDLILMDIEMPVMDGVEASRQIRGSNKAYASVPI
IAHTGDSSPITLDKIGSSGMSDFIVKPADKNRLFDKIANWI
MDAIRKVYQYAEPNLTLVGWMGFIGFPIYYIVWEFMFPQPYENLPLRILCSVLFFGIIYRNRTPFEWRRFLPAYYQVVTT
LCLPCFFFYMLLMNNWSNVWVMSFMSAIFLHILLVHITSVMFAQTFAGIGLATFFAWVVQGFHLELTMDWTHVPIFLFIY
LFGNLFYFRNQVEHEAKVSIAKSFGAGIAHEMRNPLSGLLTSIDVIQSVLPNPKEGKKEQYTLSDEDVTLLREVSSDAMK
IIHSGNETIDLLLTSIDENRVSRSTFKKHSAQSVVESAIESFSYKRSTDRFAISLDVRSEFDFLGSDTLLKYVMYNLFKN
AFHHRSSEDFHIHVTMYSDEFANQIVVTDNGSGIAPEVLQSIFQDFYTTGKSGNYGLGLPFCKKVMRSFGGDIRCQSEVG
EWSQFTMTFPTIGSSAVKEIKSELTKLKTILFVSEQNILVSKVTDIARFMGFELTVLDVPAVLKKKEYEFEFDLILIDME
SLDARGSHIDKVESLLSFTEARIVYMFEHHPIQRARSVSFEPIWVETQAWLLNTRATIDRLLYDANYVVPSMPAKPLDST
NKRTIMVVDDNESLRKFTAMLLEKQGFEVIQTEDGLQAINALNENDVDLILMDIEMPVMDGVEASRQIRGSNKAYASVPI
IAHTGDSSPITLDKIGSSGMSDFIVKPADKNRLFDKIANWI
Nucleotide
Download Length: 2046 bp
>NTDB_id=268152 C1N50_RS21505 WP_103414785.1 1061556..1063601(-) (cqsS) [Vibrio campbellii strain BoB-53]
ATGGACGCGATTCGCAAAGTATATCAGTACGCAGAACCCAACCTTACCCTCGTAGGATGGATGGGCTTCATAGGCTTTCC
TATTTACTACATCGTTTGGGAGTTCATGTTCCCGCAGCCGTACGAAAACCTACCGCTTCGTATTCTCTGCTCAGTCTTAT
TCTTCGGCATCATTTATCGTAATCGTACGCCATTTGAGTGGCGTAGGTTCTTACCCGCCTATTATCAAGTGGTCACAACG
CTCTGCTTGCCTTGCTTCTTCTTTTACATGTTGCTGATGAACAACTGGTCGAATGTATGGGTGATGTCGTTTATGTCGGC
GATTTTTCTGCACATTCTGCTCGTGCATATCACATCGGTGATGTTTGCCCAGACATTTGCGGGAATTGGTCTGGCGACGT
TTTTTGCTTGGGTAGTACAGGGGTTTCACCTCGAACTCACCATGGATTGGACGCACGTACCGATCTTCTTGTTTATTTAT
CTCTTTGGTAACTTGTTCTATTTCCGAAATCAGGTAGAGCATGAAGCAAAAGTCTCAATCGCAAAGTCTTTTGGGGCAGG
TATCGCCCACGAAATGCGAAACCCACTTAGTGGTTTATTAACTTCTATCGATGTCATTCAATCCGTTTTGCCAAACCCGA
AAGAGGGCAAGAAAGAGCAGTACACGTTAAGTGATGAAGATGTGACACTGTTACGAGAAGTCAGCAGTGACGCAATGAAG
ATCATTCATTCCGGAAACGAAACCATTGATTTGCTTCTTACTTCAATTGATGAGAACCGTGTTTCTCGCTCGACATTTAA
AAAACACTCTGCACAATCTGTCGTTGAGAGTGCGATTGAAAGTTTCAGTTACAAACGATCGACAGACCGTTTTGCTATCT
CCTTGGATGTAAGAAGTGAGTTCGATTTCTTGGGCAGCGATACGTTGCTTAAGTATGTGATGTACAACTTGTTCAAGAAC
GCCTTCCACCACCGTAGTTCAGAAGACTTCCACATACACGTCACCATGTACAGTGATGAATTTGCCAACCAAATTGTGGT
GACTGATAACGGTTCGGGCATTGCGCCAGAAGTTCTTCAAAGTATTTTCCAAGATTTCTACACTACGGGTAAGTCAGGAA
ACTACGGCCTTGGACTGCCTTTCTGTAAGAAAGTGATGCGTTCATTTGGCGGTGATATTCGTTGCCAATCAGAAGTCGGC
GAGTGGTCTCAGTTCACGATGACTTTCCCTACGATTGGCTCAAGCGCAGTCAAAGAGATTAAGAGTGAGCTAACCAAGCT
AAAAACGATTTTGTTTGTGAGCGAGCAAAACATCTTAGTTTCGAAAGTGACGGACATTGCTCGTTTTATGGGATTCGAAC
TCACGGTTCTCGATGTTCCTGCGGTTCTAAAAAAGAAAGAATACGAGTTCGAGTTTGATTTGATCCTGATAGATATGGAA
AGTTTAGACGCCCGTGGCAGCCATATAGATAAGGTTGAGTCGTTACTGTCGTTCACTGAAGCTCGCATTGTTTACATGTT
TGAGCACCATCCAATTCAAAGAGCGAGAAGCGTTTCTTTTGAACCTATTTGGGTAGAGACACAAGCCTGGCTTCTGAATA
CTCGAGCGACCATCGACCGTCTACTGTATGACGCTAATTATGTTGTTCCATCGATGCCAGCGAAGCCGCTCGACTCAACA
AACAAGCGAACCATTATGGTGGTTGACGACAATGAGTCTCTACGCAAGTTTACGGCCATGCTGCTTGAGAAGCAGGGTTT
TGAAGTGATCCAAACCGAAGATGGGCTGCAGGCAATCAACGCGTTGAATGAGAACGATGTTGACTTAATCCTAATGGACA
TCGAAATGCCGGTGATGGATGGTGTAGAAGCATCTCGTCAAATCAGAGGTTCAAATAAGGCGTACGCTTCGGTGCCTATT
ATTGCGCATACTGGTGATAGCTCACCGATAACACTGGACAAGATTGGTTCATCTGGCATGTCGGATTTCATCGTTAAACC
TGCGGATAAGAACAGGTTGTTCGACAAGATTGCGAACTGGATTTAG
ATGGACGCGATTCGCAAAGTATATCAGTACGCAGAACCCAACCTTACCCTCGTAGGATGGATGGGCTTCATAGGCTTTCC
TATTTACTACATCGTTTGGGAGTTCATGTTCCCGCAGCCGTACGAAAACCTACCGCTTCGTATTCTCTGCTCAGTCTTAT
TCTTCGGCATCATTTATCGTAATCGTACGCCATTTGAGTGGCGTAGGTTCTTACCCGCCTATTATCAAGTGGTCACAACG
CTCTGCTTGCCTTGCTTCTTCTTTTACATGTTGCTGATGAACAACTGGTCGAATGTATGGGTGATGTCGTTTATGTCGGC
GATTTTTCTGCACATTCTGCTCGTGCATATCACATCGGTGATGTTTGCCCAGACATTTGCGGGAATTGGTCTGGCGACGT
TTTTTGCTTGGGTAGTACAGGGGTTTCACCTCGAACTCACCATGGATTGGACGCACGTACCGATCTTCTTGTTTATTTAT
CTCTTTGGTAACTTGTTCTATTTCCGAAATCAGGTAGAGCATGAAGCAAAAGTCTCAATCGCAAAGTCTTTTGGGGCAGG
TATCGCCCACGAAATGCGAAACCCACTTAGTGGTTTATTAACTTCTATCGATGTCATTCAATCCGTTTTGCCAAACCCGA
AAGAGGGCAAGAAAGAGCAGTACACGTTAAGTGATGAAGATGTGACACTGTTACGAGAAGTCAGCAGTGACGCAATGAAG
ATCATTCATTCCGGAAACGAAACCATTGATTTGCTTCTTACTTCAATTGATGAGAACCGTGTTTCTCGCTCGACATTTAA
AAAACACTCTGCACAATCTGTCGTTGAGAGTGCGATTGAAAGTTTCAGTTACAAACGATCGACAGACCGTTTTGCTATCT
CCTTGGATGTAAGAAGTGAGTTCGATTTCTTGGGCAGCGATACGTTGCTTAAGTATGTGATGTACAACTTGTTCAAGAAC
GCCTTCCACCACCGTAGTTCAGAAGACTTCCACATACACGTCACCATGTACAGTGATGAATTTGCCAACCAAATTGTGGT
GACTGATAACGGTTCGGGCATTGCGCCAGAAGTTCTTCAAAGTATTTTCCAAGATTTCTACACTACGGGTAAGTCAGGAA
ACTACGGCCTTGGACTGCCTTTCTGTAAGAAAGTGATGCGTTCATTTGGCGGTGATATTCGTTGCCAATCAGAAGTCGGC
GAGTGGTCTCAGTTCACGATGACTTTCCCTACGATTGGCTCAAGCGCAGTCAAAGAGATTAAGAGTGAGCTAACCAAGCT
AAAAACGATTTTGTTTGTGAGCGAGCAAAACATCTTAGTTTCGAAAGTGACGGACATTGCTCGTTTTATGGGATTCGAAC
TCACGGTTCTCGATGTTCCTGCGGTTCTAAAAAAGAAAGAATACGAGTTCGAGTTTGATTTGATCCTGATAGATATGGAA
AGTTTAGACGCCCGTGGCAGCCATATAGATAAGGTTGAGTCGTTACTGTCGTTCACTGAAGCTCGCATTGTTTACATGTT
TGAGCACCATCCAATTCAAAGAGCGAGAAGCGTTTCTTTTGAACCTATTTGGGTAGAGACACAAGCCTGGCTTCTGAATA
CTCGAGCGACCATCGACCGTCTACTGTATGACGCTAATTATGTTGTTCCATCGATGCCAGCGAAGCCGCTCGACTCAACA
AACAAGCGAACCATTATGGTGGTTGACGACAATGAGTCTCTACGCAAGTTTACGGCCATGCTGCTTGAGAAGCAGGGTTT
TGAAGTGATCCAAACCGAAGATGGGCTGCAGGCAATCAACGCGTTGAATGAGAACGATGTTGACTTAATCCTAATGGACA
TCGAAATGCCGGTGATGGATGGTGTAGAAGCATCTCGTCAAATCAGAGGTTCAAATAAGGCGTACGCTTCGGTGCCTATT
ATTGCGCATACTGGTGATAGCTCACCGATAACACTGGACAAGATTGGTTCATCTGGCATGTCGGATTTCATCGTTAAACC
TGCGGATAAGAACAGGTTGTTCGACAAGATTGCGAACTGGATTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cqsS | Vibrio cholerae strain A1552 |
48.029 |
100 |
0.483 |