Detailed information NTG0267538

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: C0971_RS16315
• Genome accession: NZ_CP026143
• Coordinates: 3180896..3182035 (-)
• Length: 379 a.a.
• NCBI ID: WP_248892339.1
• Uniprot ID: -
• Organism: Bacillus methanolicus strain DFS2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3175896..3187035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0971_RS16295 (C0971_16310)	-	3176246..3177742 (-)	1497	WP_283108086.1	DEAD/DEAH box helicase	-
C0971_RS16300 (C0971_16315)	-	3177766..3178851 (-)	1086	WP_248892338.1	hypothetical protein	-
C0971_RS16305 (C0971_16320)	-	3179024..3179863 (-)	840	WP_034669156.1	DegV family protein	-
C0971_RS18315	-	3179940..3180068 (-)	129	WP_283108088.1	hypothetical protein	-
C0971_RS16310 (C0971_16325)	degU	3180173..3180856 (-)	684	WP_003346475.1	response regulator transcription factor	Regulator
C0971_RS16315 (C0971_16330)	degS	3180896..3182035 (-)	1140	WP_248892339.1	sensor histidine kinase	Regulator
C0971_RS16320 (C0971_16335)	-	3182426..3183058 (+)	633	WP_003346479.1	YigZ family protein	-
C0971_RS16325 (C0971_16340)	-	3183163..3184191 (+)	1029	WP_248892340.1	LCP family protein	-
C0971_RS16330 (C0971_16345)	-	3184346..3186778 (+)	2433	WP_248892341.1	SH3 domain-containing protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 44283.94 Da
• Isoelectric Point: 6.2149

>NTDB_id=267538 C0971_RS16315 WP_248892339.1 3180896..3182035(-) (degS) [Bacillus methanolicus strain DFS2]
MKAINFDTKTLDQILEKMIDTVVNSKDEIFRISEQCRKDYETLTDELKDVKQMVLQTIAEGDRLEVQARLARKRLSEVSM
HFKDYTEEEVRDAYEKAHNLQMDLTMNRQLEKQLRQRRDEIERRLAGLSETIERADYLISQITIVLNYLMSDLKQVGEVL
ENAKQKQDFGLKIIEAQEEERKRLSREIHDGPAQMLANVMMRSDLIERIYKERSAEEAIDEIRNLKRMVRSALYEVRRII
YDLRPMALDDLGLVPTLRKYLQTIEEYHNRTKIYFFNIGEDKRLPAKYEVALFRLVQESVQNALKHADASEIQVKLEINK
SHVNVVIKDNGKGFDTNEKKPESFGILGMKERVDLLEGEISIHSKIGAGTVIIIQVPLK

Nucleotide

• Length: 1140 bp

>NTDB_id=267538 C0971_RS16315 WP_248892339.1 3180896..3182035(-) (degS) [Bacillus methanolicus strain DFS2]
ATGAAAGCGATAAATTTTGATACGAAAACACTAGATCAAATTCTTGAAAAAATGATTGACACCGTTGTAAACAGCAAAGA
TGAAATTTTTCGAATCAGTGAGCAATGCCGCAAAGACTATGAAACTTTGACTGATGAACTAAAAGATGTAAAACAAATGG
TTCTTCAAACGATTGCTGAGGGGGACAGGCTTGAAGTTCAAGCCCGCCTTGCAAGAAAGCGCCTTTCCGAAGTGAGCATG
CATTTTAAAGATTATACAGAAGAAGAGGTCCGAGATGCCTATGAAAAGGCGCACAACCTCCAAATGGACCTTACGATGAA
TCGGCAGCTGGAAAAACAACTGAGGCAGCGCAGAGATGAAATTGAACGCAGGCTCGCTGGCCTATCGGAGACGATTGAAC
GGGCAGATTATCTTATTTCGCAAATAACGATTGTTTTAAATTATTTAATGAGTGATTTAAAGCAAGTGGGAGAAGTGCTG
GAAAATGCAAAACAAAAACAGGATTTTGGCCTGAAAATTATCGAAGCCCAAGAGGAAGAAAGAAAGAGGCTGTCCAGAGA
AATTCATGACGGACCGGCGCAAATGCTTGCCAATGTGATGATGCGTTCTGATTTAATTGAACGCATATATAAGGAAAGAA
GTGCAGAAGAAGCGATCGATGAAATCCGCAATTTAAAGCGGATGGTTCGATCTGCTCTGTACGAGGTGCGGCGAATCATT
TACGATTTGCGTCCAATGGCACTTGACGACCTTGGCCTCGTTCCTACCCTCAGAAAATATTTGCAGACTATCGAAGAATA
TCATAATAGGACAAAAATTTATTTTTTCAACATAGGTGAAGATAAAAGATTACCAGCAAAATACGAGGTTGCACTTTTCC
GCCTTGTGCAGGAATCTGTCCAAAATGCTTTGAAGCACGCTGATGCAAGTGAAATTCAAGTGAAATTGGAGATTAATAAA
TCACATGTAAACGTTGTAATAAAGGATAATGGAAAAGGTTTTGATACAAATGAGAAGAAGCCTGAATCGTTTGGCATCCT
TGGAATGAAGGAACGGGTAGATCTGCTTGAAGGCGAAATCTCGATTCATTCTAAAATAGGTGCCGGTACGGTTATCATCA
TACAAGTACCATTGAAGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (289-378)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	65.274	100	0.66