Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   C0971_RS12015 Genome accession   NZ_CP026143
Coordinates   2371474..2372265 (-) Length   263 a.a.
NCBI ID   WP_004435551.1    Uniprot ID   I3EAA8
Organism   Bacillus methanolicus strain DFS2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2366474..2377265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0971_RS11995 (C0971_12055) istA 2366562..2368061 (-) 1500 WP_248893985.1 IS21 family transposase -
  C0971_RS12000 (C0971_12060) - 2368354..2368593 (-) 240 WP_248891806.1 hypothetical protein -
  C0971_RS12005 (C0971_12065) - 2368978..2370423 (+) 1446 Protein_2338 IS1182 family transposase -
  C0971_RS12010 (C0971_12070) - 2370407..2371309 (-) 903 WP_248891807.1 tyrosine-type recombinase/integrase -
  C0971_RS12015 (C0971_12075) spo0A 2371474..2372265 (-) 792 WP_004435551.1 sporulation transcription factor Spo0A Regulator
  C0971_RS12020 (C0971_12080) spoIVB 2372553..2373842 (-) 1290 WP_248891808.1 SpoIVB peptidase -
  C0971_RS12025 (C0971_12085) recN 2373967..2375658 (-) 1692 WP_248891809.1 DNA repair protein RecN Machinery gene
  C0971_RS12030 (C0971_12090) argR 2375675..2376124 (-) 450 WP_004435554.1 transcriptional regulator ArgR -
  C0971_RS12035 (C0971_12095) - 2376347..2377189 (-) 843 WP_248891811.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 29380.93 Da        Isoelectric Point: 6.3904

>NTDB_id=267521 C0971_RS12015 WP_004435551.1 2371474..2372265(-) (spo0A) [Bacillus methanolicus strain DFS2]
MRKIKVCVVDDNRELVGLLEEYISSQDDMEVVGVAHNGQECLDLLEEVDPDVLVLDIIMPHLDGLAVLERLRTLKKNPLP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLANHIRQVNGNSNTLIRKSSAPSLRPQTEQKPKNLEASITSIIHEI
GVPAHIKGYLYLREAISMVFNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMSK
AKPTNSEFIAMVADKLRLEHRAS

Nucleotide


Download         Length: 792 bp        

>NTDB_id=267521 C0971_RS12015 WP_004435551.1 2371474..2372265(-) (spo0A) [Bacillus methanolicus strain DFS2]
TTGAGAAAAATAAAAGTCTGTGTCGTGGATGACAATAGAGAACTTGTAGGTTTGCTTGAAGAATATATATCTTCGCAGGA
TGATATGGAAGTAGTCGGTGTGGCACATAACGGACAGGAATGTTTGGATTTGCTTGAAGAAGTTGATCCTGATGTACTTG
TTTTAGATATTATCATGCCTCATTTAGACGGGCTGGCTGTGCTTGAAAGACTTCGCACATTGAAAAAGAATCCGCTTCCA
AATGTAATCATGCTGACTGCCTTTGGACAGGAAGATGTAACGAAAAAAGCAGTTGATCTTGGAGCATCTTATTTCATATT
AAAACCGTTTGATATGGAAAATCTCGCAAACCACATTCGCCAAGTGAATGGAAATTCAAACACACTAATCCGCAAATCTT
CTGCACCAAGCCTTCGCCCGCAAACTGAACAAAAACCAAAAAACTTGGAAGCAAGTATCACAAGCATCATACATGAAATT
GGCGTTCCTGCGCACATTAAGGGATATTTATATTTGCGGGAAGCCATCTCCATGGTTTTTAATGATATTGAACTTCTCGG
CTCAATTACAAAAGTGCTTTATCCGGATATCGCTAAAAAATACAATACAACAGCAAGCCGTGTTGAAAGAGCAATCCGTC
ATGCGATCGAAGTAGCGTGGAGCCGTGGCAATATTGATTCCATTTCATCTCTCTTCGGCTATACAGTAAGCATGTCTAAA
GCAAAACCTACGAACTCTGAATTCATTGCGATGGTAGCTGACAAATTAAGGCTTGAACATAGAGCATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(153-256)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I3EAA8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.821

Multiple sequence alignment