Detailed information NTG0026736

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BCEN2424_RS14045
• Genome accession: NC_008542
• Coordinates: 3104388..3105554 (+)
• Length: 388 a.a.
• NCBI ID: WP_011694408.1
• Uniprot ID: -
• Organism: Burkholderia cenocepacia HI2424
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3099388..3110554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCEN2424_RS14015 (Bcen2424_2803)	-	3100030..3100635 (+)	606	WP_011546248.1	50S ribosomal protein L25/general stress protein Ctc	-
BCEN2424_RS14020 (Bcen2424_2804)	pth	3100756..3101355 (+)	600	WP_011546249.1	aminoacyl-tRNA hydrolase	-
BCEN2424_RS14025 (Bcen2424_2805)	hisC	3101473..3102540 (+)	1068	WP_011546250.1	histidinol-phosphate transaminase	-
BCEN2424_RS14030 (Bcen2424_2806)	-	3102623..3102889 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BCEN2424_RS14035 (Bcen2424_2807)	coaD	3102948..3103445 (-)	498	WP_006477773.1	pantetheine-phosphate adenylyltransferase	-
BCEN2424_RS14040 (Bcen2424_2808)	rsmD	3103557..3104171 (-)	615	WP_011546251.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BCEN2424_RS14045 (Bcen2424_2809)	pilA	3104388..3105554 (+)	1167	WP_011694408.1	signal recognition particle-docking protein FtsY	Machinery gene
BCEN2424_RS14050 (Bcen2424_2810)	maiA	3105654..3106298 (-)	645	WP_011546253.1	maleylacetoacetate isomerase	-
BCEN2424_RS14055 (Bcen2424_2811)	ybiB	3106478..3107452 (+)	975	WP_011546254.1	DNA-binding protein YbiB	-
BCEN2424_RS14060 (Bcen2424_2812)	leuA	3107830..3109476 (+)	1647	WP_011546255.1	2-isopropylmalate synthase	-
BCEN2424_RS14065 (Bcen2424_2813)	-	3109620..3110003 (-)	384	WP_006477767.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 41200.08 Da
• Isoelectric Point: 4.6402

>NTDB_id=26736 BCEN2424_RS14045 WP_011694408.1 3104388..3105554(+) (pilA) [Burkholderia cenocepacia HI2424]
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPPASAQPAAPAVVMTVTPTNDGRDEVVETVEI
VPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQ
QVKDALHDLLVELLTPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQN
ALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1167 bp

>NTDB_id=26736 BCEN2424_RS14045 WP_011694408.1 3104388..3105554(+) (pilA) [Burkholderia cenocepacia HI2424]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCGGCCGAGGCTGCGCCCGTGCTCGACGCGCCGCCCGCGGCCGACGTGCCGCCGGCGAGCGCGC
AACCGGCTGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATC
GTCCCGCCGCCGCTGCAGGACGCCTCGGCGAAGAAGTCGTGGCTCGCACGCCTGAAAACGGGGCTCGCGAAGACGGGTTC
GAGCATCACCGGCGTGTTCGTCAATACGAAAATCGACGAGGATCTGTACGAGGAACTCGAAACCGCGCTGCTGATGTCCG
ACGCGGGCGTCGACGCGACCGAATACCTGCTCGACGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAG
CAGGTGAAGGATGCACTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCA
GCCGCTCGTGATGATGATCGCCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGA
GCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAG
CGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGC
GCGCAAGATCGACGTGATGATGGCCGATACGGCCGGCCGCCTGCCGACGCAACTCCACCTGATGGAAGAGCTGAAGAAGG
TGAAGCGCGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTACTGCTGGTGATCGACGCGAACACCGGCCAAAAC
GCGCTCACGCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTGACGAAGCTCGACGGCACCGCGAA
AGGCGGGATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACC
TGCAGCCGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (189-388)

• SRP54-type protein, helical bundle domain (SRP54_N) (106-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.81	100	0.582