Detailed information NTG0267262

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: LCU_RS10175
• Genome accession: NZ_CP026116
• Coordinates: 1361319..1362026 (+)
• Length: 235 a.a.
• NCBI ID: WP_081038321.1
• Uniprot ID: A0AAJ0PCE4
• Organism: Latilactobacillus curvatus JCM 1096 = DSM 20019
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1356319..1367026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCU_RS07115 (LCU_07130)	fusA	1357896..1359983 (-)	2088	WP_004270213.1	elongation factor G	-
LCU_RS07120 (LCU_07135)	rpsG	1360075..1360545 (-)	471	WP_054644265.1	30S ribosomal protein S7	-
LCU_RS07125 (LCU_07140)	rpsL	1360635..1361048 (-)	414	WP_004270179.1	30S ribosomal protein S12	-
LCU_RS10175 (LCU_07145)	comC	1361319..1362026 (+)	708	WP_081038321.1	A24 family peptidase	Machinery gene
LCU_RS07135 (LCU_07150)	rpoC	1362099..1365740 (-)	3642	WP_004270200.1	DNA-directed RNA polymerase subunit beta'	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26544.85 Da
• Isoelectric Point: 6.9137

>NTDB_id=267262 LCU_RS10175 WP_081038321.1 1361319..1362026(+) (comC) [Latilactobacillus curvatus JCM 1096 = DSM 20019]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGSTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLHHPVVLALVGRRPIPFVPYISYGVLIVLFIANT

Nucleotide

• Length: 708 bp

>NTDB_id=267262 LCU_RS10175 WP_081038321.1 1361319..1362026(+) (comC) [Latilactobacillus curvatus JCM 1096 = DSM 20019]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGTGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGTGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGGCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGTTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTATTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCAATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCAGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATTGATAGTCTCCACCATCCAGTTGTCCTCGCCTTAGTCGGACGCC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGCAAACACATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (12-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	50.661	96.596	0.489