Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | LCU_RS04695 | Genome accession | NZ_CP026116 |
| Coordinates | 887981..888982 (-) | Length | 333 a.a. |
| NCBI ID | WP_056965892.1 | Uniprot ID | A0AAJ0LI70 |
| Organism | Latilactobacillus curvatus JCM 1096 = DSM 20019 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 882981..893982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LCU_RS04660 (LCU_04675) | - | 883346..883798 (-) | 453 | WP_056967146.1 | hypothetical protein | - |
| LCU_RS04665 (LCU_04680) | - | 883858..885051 (-) | 1194 | WP_004270911.1 | acetate kinase | - |
| LCU_RS04670 (LCU_04685) | - | 885073..886083 (-) | 1011 | WP_054644024.1 | class I SAM-dependent methyltransferase | - |
| LCU_RS04675 (LCU_04690) | - | 886208..886531 (-) | 324 | WP_039099486.1 | hypothetical protein | - |
| LCU_RS04680 (LCU_04695) | - | 886509..886889 (-) | 381 | WP_004270914.1 | ComGF family competence protein | - |
| LCU_RS09955 | - | 886960..887265 (-) | 306 | WP_056965894.1 | hypothetical protein | - |
| LCU_RS04685 (LCU_04700) | - | 887252..887644 (-) | 393 | WP_004270899.1 | hypothetical protein | - |
| LCU_RS04690 (LCU_04705) | comGC | 887676..887984 (-) | 309 | WP_004270901.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LCU_RS04695 (LCU_04710) | comGB | 887981..888982 (-) | 1002 | WP_056965892.1 | type II secretion system F family protein | Machinery gene |
| LCU_RS04700 (LCU_04715) | comGA | 888972..889847 (-) | 876 | WP_039099523.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LCU_RS04705 (LCU_04720) | - | 889951..890682 (-) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LCU_RS04710 (LCU_04725) | - | 890772..891272 (-) | 501 | WP_056965890.1 | VanZ family protein | - |
| LCU_RS04715 (LCU_04730) | - | 891375..891752 (+) | 378 | WP_056965888.1 | hypothetical protein | - |
| LCU_RS04725 (LCU_04740) | - | 891933..892268 (-) | 336 | WP_056965886.1 | hypothetical protein | - |
| LCU_RS04730 (LCU_04745) | - | 892463..892702 (+) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
| LCU_RS04735 (LCU_04750) | - | 892793..893806 (-) | 1014 | WP_004265264.1 | YeiH family protein | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37903.13 Da Isoelectric Point: 9.6278
>NTDB_id=267245 LCU_RS04695 WP_056965892.1 887981..888982(-) (comGB) [Latilactobacillus curvatus JCM 1096 = DSM 20019]
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPTHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
VGGLISVYLFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPTHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
VGGLISVYLFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
Nucleotide
Download Length: 1002 bp
>NTDB_id=267245 LCU_RS04695 WP_056965892.1 887981..888982(-) (comGB) [Latilactobacillus curvatus JCM 1096 = DSM 20019]
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGGCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCGCTTGAGTTCATGCCGATTGTTTTTCCGACACAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAACACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GTTGGTGGTCTGATTAGTGTGTATTTATTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGCTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAGGGGGGCACGCTATTAGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGGCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCGCTTGAGTTCATGCCGATTGTTTTTCCGACACAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAACACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GTTGGTGGTCTGATTAGTGTGTATTTATTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGCTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAGGGGGGCACGCTATTAGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
57.27 |
100 |
0.58 |