Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LCU_RS04430 Genome accession   NZ_CP026116
Coordinates   840182..841453 (-) Length   423 a.a.
NCBI ID   WP_056966581.1    Uniprot ID   A0A385ADH6
Organism   Latilactobacillus curvatus JCM 1096 = DSM 20019     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 835182..846453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LCU_RS04425 (LCU_04440) - 838435..840156 (-) 1722 WP_039098737.1 proline--tRNA ligase -
  LCU_RS04430 (LCU_04445) eeP 840182..841453 (-) 1272 WP_056966581.1 RIP metalloprotease RseP Regulator
  LCU_RS04435 (LCU_04450) - 841718..842506 (-) 789 WP_004270081.1 phosphatidate cytidylyltransferase -
  LCU_RS04440 (LCU_04455) - 842521..843273 (-) 753 WP_004265407.1 isoprenyl transferase -
  LCU_RS04445 (LCU_04460) - 843587..846334 (+) 2748 WP_056966578.1 YhgE/Pip domain-containing protein -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45993.72 Da        Isoelectric Point: 9.9118

>NTDB_id=267242 LCU_RS04430 WP_056966581.1 840182..841453(-) (eeP) [Latilactobacillus curvatus JCM 1096 = DSM 20019]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLLLDEQETVQKINTSDKVTTLNGVPFQIAKTDLQKELWIEGYESGDESELKRYSVSHDATIVESDGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIVGTVMPNSPAQKAGLKMDDRLVKVAGKKVTTFTDF
SSVIAKYPNKPVNVQVKRAKQTKSLEITPKAVKVEGQKGKVGQIGVTAGLNHSVGAKLKYGFTQSWANATQIFKILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSVNLGIMNLIPIPALDGGKLVINVIEAIRGKPISPEKEGIVTL
VGVGIMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=267242 LCU_RS04430 WP_056966581.1 840182..841453(-) (eeP) [Latilactobacillus curvatus JCM 1096 = DSM 20019]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGCATTTTAGTAGTGGTGCATGAATTTGGCCACTTTTACATGGCGAA
ACGTTCTGGTATTTTGGTGCGTGAATTTTCAATTGGCATGGGGCCAAAATTATTTGCAACGCGCAAAAATGGCACGACTT
ATACGATTCGTTGGTTACCACTTGGCGGCTATGTCCGCATGGCAGGGATGGCGGATGATGAATCTGAAATCGAAGCCGGC
ACGCAAGCAACCTTGCTGTTAGACGAACAAGAAACTGTTCAAAAAATTAATACAAGTGACAAAGTAACCACGTTAAACGG
TGTCCCATTTCAAATTGCAAAAACTGACTTGCAAAAAGAATTATGGATTGAAGGCTATGAAAGTGGTGACGAATCCGAAT
TAAAACGTTATTCGGTCAGTCACGATGCAACGATTGTTGAATCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTT
CAATTCCAGTCGGCTAGTTTAATCAATCGGATGTTGACCAACTTCGCAGGACCGTTCAACAACTTTATCCTTGCGATTGT
GGCGTTTGCGCTCTTTGCTTTTTTAAACGGTGGCGTCCCACAAAACAAAGCGATTGTTGGCACAGTGATGCCAAACTCGC
CAGCACAAAAAGCCGGGCTTAAAATGGATGACCGGTTAGTGAAAGTTGCTGGCAAAAAAGTCACGACGTTTACTGATTTC
AGCTCGGTGATTGCAAAATATCCGAATAAACCAGTGAATGTCCAGGTTAAACGGGCAAAGCAAACTAAGTCACTCGAAAT
CACACCTAAAGCGGTGAAAGTCGAGGGACAAAAGGGGAAAGTCGGCCAAATTGGTGTGACAGCTGGACTCAACCATAGCG
TGGGGGCTAAGTTGAAATATGGCTTCACCCAATCATGGGCGAATGCGACCCAGATTTTTAAAATTCTCGGGTCATTCTTA
ACGGGTGGTTTTTCACTCAATAAACTAGCCGGACCAGTCGGCATGTATTCAATGACGACGCAATTCGCGAGTCAAGGCTT
TACAATGCTCGTCTACTTCTTAGCGTTCTTATCCGTCAACTTGGGGATTATGAACCTGATTCCAATTCCAGCCCTCGATG
GTGGTAAGCTCGTGATCAACGTGATTGAAGCGATTCGCGGTAAACCCATCTCACCGGAAAAAGAAGGCATTGTCACCCTT
GTCGGGGTCGGCATCATGGTCGTCTTAATGGTCTTGGTTACATGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-409)

PDZ domain (PDZ_6)

(205-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A385ADH6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.907

100

0.487
  eeP Streptococcus thermophilus LMG 18311

47.907

100

0.487

Multiple sequence alignment