Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C2U64_RS12055 | Genome accession | NZ_CP026089 |
| Coordinates | 2236116..2236496 (-) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain WCHAP005069 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2231116..2241496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U64_RS12025 (C2U64_12010) | tadA | 2231120..2231623 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| C2U64_RS12030 (C2U64_12015) | hibch | 2231629..2232753 (-) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C2U64_RS12035 (C2U64_12020) | ung | 2232750..2233463 (-) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| C2U64_RS12040 (C2U64_12025) | - | 2233517..2234113 (-) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C2U64_RS12045 (C2U64_12030) | gspK | 2234341..2235300 (-) | 960 | WP_002121457.1 | type II secretion system minor pseudopilin GspK | - |
| C2U64_RS12050 (C2U64_12035) | xcpW | 2235301..2236116 (-) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C2U64_RS12055 (C2U64_12040) | xcpV | 2236116..2236496 (-) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C2U64_RS12060 (C2U64_12045) | - | 2236486..2237040 (-) | 555 | WP_002121405.1 | type II secretion system protein | - |
| C2U64_RS12065 (C2U64_12050) | - | 2237047..2237655 (-) | 609 | WP_002121414.1 | TetR/AcrR family transcriptional regulator | - |
| C2U64_RS12070 (C2U64_12055) | ycfH | 2237692..2238465 (-) | 774 | WP_002121462.1 | TatD family hydrolase | - |
| C2U64_RS12075 (C2U64_12060) | pilZ | 2238483..2238824 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| C2U64_RS12080 (C2U64_12065) | holB | 2238835..2239815 (-) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| C2U64_RS12085 (C2U64_12070) | kdsB | 2239829..2240590 (-) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=267020 C2U64_RS12055 WP_002121425.1 2236116..2236496(-) (xcpV) [Acinetobacter pittii strain WCHAP005069]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=267020 C2U64_RS12055 WP_002121425.1 2236116..2236496(-) (xcpV) [Acinetobacter pittii strain WCHAP005069]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |