Detailed information NTG0267019

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C2U64_RS12050
• Genome accession: NZ_CP026089
• Coordinates: 2235301..2236116 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain WCHAP005069
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2230301..2241116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2U64_RS12020 (C2U64_12005)	-	2230609..2231049 (-)	441	WP_002121449.1	SRPBCC family protein	-
C2U64_RS12025 (C2U64_12010)	tadA	2231120..2231623 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
C2U64_RS12030 (C2U64_12015)	hibch	2231629..2232753 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
C2U64_RS12035 (C2U64_12020)	ung	2232750..2233463 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
C2U64_RS12040 (C2U64_12025)	-	2233517..2234113 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
C2U64_RS12045 (C2U64_12030)	gspK	2234341..2235300 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
C2U64_RS12050 (C2U64_12035)	xcpW	2235301..2236116 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C2U64_RS12055 (C2U64_12040)	xcpV	2236116..2236496 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
C2U64_RS12060 (C2U64_12045)	-	2236486..2237040 (-)	555	WP_002121405.1	type II secretion system protein	-
C2U64_RS12065 (C2U64_12050)	-	2237047..2237655 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
C2U64_RS12070 (C2U64_12055)	ycfH	2237692..2238465 (-)	774	WP_002121462.1	TatD family hydrolase	-
C2U64_RS12075 (C2U64_12060)	pilZ	2238483..2238824 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
C2U64_RS12080 (C2U64_12065)	holB	2238835..2239815 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
C2U64_RS12085 (C2U64_12070)	kdsB	2239829..2240590 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=267019 C2U64_RS12050 WP_002121460.1 2235301..2236116(-) (xcpW) [Acinetobacter pittii strain WCHAP005069]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=267019 C2U64_RS12050 WP_002121460.1 2235301..2236116(-) (xcpW) [Acinetobacter pittii strain WCHAP005069]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738