Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK70_RS13695 | Genome accession | NZ_CP026080 |
| Coordinates | 2661516..2661911 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_12 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2656516..2666911
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK70_RS13665 (RK70_013665) | - | 2657774..2658178 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| RK70_RS13670 (RK70_013670) | - | 2658516..2658608 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| RK70_RS13675 (RK70_013675) | - | 2658740..2658973 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK70_RS13680 (RK70_013680) | murA | 2659084..2660349 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK70_RS13685 (RK70_013685) | fabZ | 2660383..2660823 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK70_RS13690 (RK70_013690) | - | 2660882..2661322 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| RK70_RS13695 (RK70_013695) | ssb | 2661516..2661911 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| RK70_RS13700 (RK70_013700) | sceD | 2662300..2662995 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| RK70_RS13705 (RK70_013705) | tenA | 2663381..2664070 (+) | 690 | WP_000396076.1 | thiaminase II | - |
| RK70_RS13710 (RK70_013710) | thiD | 2664063..2664893 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK70_RS13715 (RK70_013715) | thiM | 2664877..2665668 (+) | 792 | WP_001108479.1 | hydroxyethylthiazole kinase | - |
| RK70_RS13720 (RK70_013720) | thiE | 2665670..2666311 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=266872 RK70_RS13695 WP_000932694.1 2661516..2661911(+) (ssb) [Staphylococcus aureus strain FDAARGOS_12]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=266872 RK70_RS13695 WP_000932694.1 2661516..2661911(+) (ssb) [Staphylococcus aureus strain FDAARGOS_12]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |