Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK67_RS07835 | Genome accession | NZ_CP026079 |
| Coordinates | 1536382..1536777 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1531382..1541777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK67_RS07805 (RK67_007805) | - | 1532640..1533044 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| RK67_RS07810 (RK67_007810) | - | 1533382..1533474 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| RK67_RS07815 (RK67_007815) | - | 1533606..1533839 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK67_RS07820 (RK67_007820) | murA | 1533950..1535215 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK67_RS07825 (RK67_007825) | fabZ | 1535249..1535689 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK67_RS07830 (RK67_007830) | - | 1535748..1536188 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| RK67_RS07835 (RK67_007835) | ssb | 1536382..1536777 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| RK67_RS07840 (RK67_007840) | sceD | 1537166..1537861 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| RK67_RS07845 (RK67_007845) | tenA | 1538248..1538937 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| RK67_RS07850 (RK67_007850) | thiD | 1538930..1539760 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK67_RS07855 (RK67_007855) | thiM | 1539744..1540535 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| RK67_RS07860 (RK67_007860) | thiE | 1540537..1541178 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=266804 RK67_RS07835 WP_000932694.1 1536382..1536777(+) (ssb) [Staphylococcus aureus strain FDAARGOS_9]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=266804 RK67_RS07835 WP_000932694.1 1536382..1536777(+) (ssb) [Staphylococcus aureus strain FDAARGOS_9]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |