Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   DZ066_RS02205 Genome accession   NZ_CP031619
Coordinates   420980..422014 (+) Length   344 a.a.
NCBI ID   WP_011285080.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS29284     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 415980..427014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZ066_RS02175 (DZ066_02175) tsaE 417045..417506 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DZ066_RS02180 (DZ066_02180) - 417481..418005 (+) 525 WP_011285082.1 N-acetyltransferase -
  DZ066_RS02185 (DZ066_02185) - 418014..419297 (+) 1284 WP_002983372.1 LCP family protein -
  DZ066_RS02190 (DZ066_02190) - 419408..419764 (-) 357 WP_002988657.1 hypothetical protein -
  DZ066_RS02195 (DZ066_02195) - 419761..420180 (-) 420 WP_011285081.1 HIT family protein -
  DZ066_RS02200 (DZ066_02200) pptA 420252..420977 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  DZ066_RS02205 (DZ066_02205) pptB 420980..422014 (+) 1035 WP_011285080.1 ABC transporter permease Regulator
  DZ066_RS02210 (DZ066_02210) - 422078..422869 (+) 792 WP_002983385.1 phosphotransferase family protein -
  DZ066_RS02215 (DZ066_02215) trmB 422869..423504 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DZ066_RS02225 (DZ066_02225) - 423702..424781 (-) 1080 WP_002988667.1 tyrosine-type recombinase/integrase -
  DZ066_RS02230 (DZ066_02230) - 424898..425449 (-) 552 WP_002988670.1 hypothetical protein -
  DZ066_RS02235 (DZ066_02235) - 425460..425843 (-) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  DZ066_RS02240 (DZ066_02240) - 425857..426207 (-) 351 WP_002988676.1 helix-turn-helix transcriptional regulator -
  DZ066_RS10050 - 426533..426688 (+) 156 WP_002988678.1 hypothetical protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40272.48 Da        Isoelectric Point: 10.3422

>NTDB_id=266709 DZ066_RS02205 WP_011285080.1 420980..422014(+) (pptB) [Streptococcus pyogenes strain MGAS29284]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGYAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAILLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=266709 DZ066_RS02205 WP_011285080.1 420980..422014(+) (pptB) [Streptococcus pyogenes strain MGAS29284]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTATGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTTTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTATATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTATCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427