Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   RK79_RS11085 Genome accession   NZ_CP026067
Coordinates   2191205..2191891 (-) Length   228 a.a.
NCBI ID   WP_072357801.1    Uniprot ID   A0A6B5EZE0
Organism   Staphylococcus aureus strain FDAARGOS_21     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2186205..2196891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK79_RS11065 (RK79_011065) rpsT 2187119..2187370 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  RK79_RS11070 (RK79_011070) holA 2187415..2188389 (-) 975 WP_001282559.1 DNA polymerase III subunit delta -
  RK79_RS11075 (RK79_011075) comEC 2188446..2190647 (-) 2202 WP_042908045.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  RK79_RS11080 (RK79_011080) - 2190652..2191113 (-) 462 WP_000439693.1 ComE operon protein 2 -
  RK79_RS11085 (RK79_011085) comEA 2191205..2191891 (-) 687 WP_072357801.1 ComEA family DNA-binding protein Machinery gene
  RK79_RS11090 (RK79_011090) - 2191931..2192647 (-) 717 WP_000084828.1 class I SAM-dependent methyltransferase -
  RK79_RS11095 (RK79_011095) rsfS 2192650..2193003 (-) 354 WP_001088020.1 ribosome silencing factor -
  RK79_RS11100 (RK79_011100) yqeK 2193004..2193588 (-) 585 WP_001019325.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  RK79_RS11105 (RK79_011105) nadD 2193578..2194147 (-) 570 WP_000725160.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  RK79_RS11110 (RK79_011110) yhbY 2194150..2194440 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  RK79_RS11115 (RK79_011115) aroE 2194444..2195250 (-) 807 WP_000666752.1 shikimate dehydrogenase -
  RK79_RS11120 (RK79_011120) yqeH 2195264..2196364 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25759.47 Da        Isoelectric Point: 9.6753

>NTDB_id=266400 RK79_RS11085 WP_072357801.1 2191205..2191891(-) (comEA) [Staphylococcus aureus strain FDAARGOS_21]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNINNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=266400 RK79_RS11085 WP_072357801.1 2191205..2191891(-) (comEA) [Staphylococcus aureus strain FDAARGOS_21]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCACGTAAAAAAT
GGAAACATAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6B5EZE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

97.797

99.561

0.974
  comEA Staphylococcus aureus N315

97.797

99.561

0.974

Multiple sequence alignment