Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK78_RS14035 | Genome accession | NZ_CP026066 |
| Coordinates | 2748320..2748715 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932696.1 | Uniprot ID | A0A166JXQ7 |
| Organism | Staphylococcus aureus strain FDAARGOS_20 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2743320..2753715
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK78_RS14005 (RK78_014005) | thiE | 2743781..2744422 (-) | 642 | WP_000483150.1 | thiamine phosphate synthase | - |
| RK78_RS14010 (RK78_014010) | thiM | 2744424..2745215 (-) | 792 | WP_001108496.1 | hydroxyethylthiazole kinase | - |
| RK78_RS14015 (RK78_014015) | thiD | 2745199..2746029 (-) | 831 | WP_000594963.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK78_RS14020 (RK78_014020) | tenA | 2746022..2746711 (-) | 690 | WP_000396068.1 | thiaminase II | - |
| RK78_RS14030 (RK78_014030) | sceD | 2747236..2747931 (-) | 696 | WP_000752015.1 | lytic transglycosylase SceD | - |
| RK78_RS14035 (RK78_014035) | ssb | 2748320..2748715 (-) | 396 | WP_000932696.1 | single-stranded DNA-binding protein | Machinery gene |
| RK78_RS14040 (RK78_014040) | - | 2748909..2749349 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| RK78_RS14045 (RK78_014045) | fabZ | 2749406..2749846 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK78_RS14050 (RK78_014050) | murA | 2749880..2751145 (-) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK78_RS14055 (RK78_014055) | - | 2751256..2751489 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK78_RS14070 (RK78_014070) | - | 2752368..2752772 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15070.11 Da Isoelectric Point: 5.6824
>NTDB_id=266371 RK78_RS14035 WP_000932696.1 2748320..2748715(-) (ssb) [Staphylococcus aureus strain FDAARGOS_20]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIERYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIERYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=266371 RK78_RS14035 WP_000932696.1 2748320..2748715(-) (ssb) [Staphylococcus aureus strain FDAARGOS_20]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAGATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAGATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |
| ssb | Staphylococcus aureus MW2 |
98.473 |
100 |
0.985 |