Detailed information NTG0266345

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: DY328_RS04010
• Genome accession: NZ_CP031556
• Coordinates: 772041..773150 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain Sag27
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 767041..778150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DY328_RS03985 (DY328_03985)	-	767413..768252 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
DY328_RS03990 (DY328_03990)	pgsA	768252..768794 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
DY328_RS03995 (DY328_03995)	-	768917..770200 (-)	1284	WP_000217754.1	pitrilysin family protein	-
DY328_RS04000 (DY328_04000)	-	770202..771446 (-)	1245	WP_000706188.1	pitrilysin family protein	-
DY328_RS04005 (DY328_04005)	yaaA	771685..772038 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
DY328_RS04010 (DY328_04010)	recF	772041..773150 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
DY328_RS04015 (DY328_04015)	-	773162..774028 (-)	867	WP_000398683.1	GRP family sugar transporter	-
DY328_RS04020 (DY328_04020)	-	774084..774746 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
DY328_RS04025 (DY328_04025)	guaB	774821..776302 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
DY328_RS04030 (DY328_04030)	-	776459..776944 (-)	486	WP_001034427.1	arginine repressor	-
DY328_RS04035 (DY328_04035)	-	776954..777634 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=266345 DY328_RS04010 WP_000264863.1 772041..773150(+) (recF) [Streptococcus agalactiae strain Sag27]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=266345 DY328_RS04010 WP_000264863.1 772041..773150(+) (recF) [Streptococcus agalactiae strain Sag27]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444