Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK77_RS10580 | Genome accession | NZ_CP026064 |
| Coordinates | 2110747..2111142 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_19 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2105747..2116142
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK77_RS10545 (RK77_010545) | - | 2106892..2107296 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| RK77_RS10555 (RK77_010555) | - | 2107748..2107840 (+) | 93 | WP_031789435.1 | hypothetical protein | - |
| RK77_RS10560 (RK77_010560) | - | 2107972..2108205 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK77_RS10565 (RK77_010565) | murA | 2108316..2109581 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK77_RS10570 (RK77_010570) | fabZ | 2109615..2110055 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK77_RS10575 (RK77_010575) | - | 2110113..2110553 (-) | 441 | WP_000846750.1 | YwpF-like family protein | - |
| RK77_RS10580 (RK77_010580) | ssb | 2110747..2111142 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| RK77_RS10585 (RK77_010585) | sceD | 2111531..2112226 (+) | 696 | WP_000752002.1 | lytic transglycosylase SceD | - |
| RK77_RS10590 (RK77_010590) | tenA | 2112613..2113302 (+) | 690 | WP_000396069.1 | thiaminase II | - |
| RK77_RS10595 (RK77_010595) | thiD | 2113295..2114125 (+) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK77_RS10600 (RK77_010600) | thiM | 2114109..2114900 (+) | 792 | WP_001108482.1 | hydroxyethylthiazole kinase | - |
| RK77_RS10605 (RK77_010605) | thiE | 2114902..2115543 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=266309 RK77_RS10580 WP_000932694.1 2110747..2111142(+) (ssb) [Staphylococcus aureus strain FDAARGOS_19]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=266309 RK77_RS10580 WP_000932694.1 2110747..2111142(+) (ssb) [Staphylococcus aureus strain FDAARGOS_19]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |