Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | C2H97_RS00230 | Genome accession | NZ_CP026038 |
| Coordinates | 33211..34248 (-) | Length | 345 a.a. |
| NCBI ID | WP_070547532.1 | Uniprot ID | - |
| Organism | Bacillus subtilis PY79 strain PK1_3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 28211..39248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H97_RS00180 (C2H97_00185) | tasA | 28308..29093 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H97_RS00185 (C2H97_00190) | sipW | 29158..29730 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C2H97_RS00190 (C2H97_00195) | tapA | 29714..30475 (-) | 762 | WP_120028361.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H97_RS00195 (C2H97_00200) | yqzG | 30746..31072 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H97_RS00200 (C2H97_00205) | spoIIT | 31114..31293 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| C2H97_RS00205 (C2H97_00210) | comGG | 31365..31739 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2H97_RS00210 (C2H97_00215) | comGF | 31740..32123 (-) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| C2H97_RS00215 (C2H97_00220) | comGE | 32149..32496 (-) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| C2H97_RS00220 (C2H97_00225) | comGD | 32480..32911 (-) | 432 | WP_120028362.1 | comG operon protein ComGD | Machinery gene |
| C2H97_RS00225 (C2H97_00230) | comGC | 32901..33197 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H97_RS00230 (C2H97_00235) | comGB | 33211..34248 (-) | 1038 | WP_070547532.1 | comG operon protein ComGB | Machinery gene |
| C2H97_RS00235 (C2H97_00240) | comGA | 34235..35305 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| C2H97_RS21445 (C2H97_00245) | - | 35516..35650 (-) | 135 | WP_257786427.1 | hypothetical protein | - |
| C2H97_RS00240 (C2H97_00250) | corA | 35716..36669 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| C2H97_RS00245 (C2H97_00255) | yqhB | 36812..38140 (+) | 1329 | WP_032726166.1 | hemolysin family protein | - |
| C2H97_RS00250 (C2H97_00260) | rsbRD | 38193..39029 (-) | 837 | WP_070547534.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39682.04 Da Isoelectric Point: 9.6257
>NTDB_id=265745 C2H97_RS00230 WP_070547532.1 33211..34248(-) (comGB) [Bacillus subtilis PY79 strain PK1_3]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSSARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSSARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=265745 C2H97_RS00230 WP_070547532.1 33211..34248(-) (comGB) [Bacillus subtilis PY79 strain PK1_3]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCATCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCATCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.452 |
93.623 |
0.922 |