Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   C2H95_RS09205 Genome accession   NZ_CP026037
Coordinates   1788695..1788886 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PK5_17     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1783695..1793886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H95_RS09175 (C2H95_09145) argF 1784559..1785518 (+) 960 WP_021479560.1 ornithine carbamoyltransferase -
  C2H95_RS09180 (C2H95_09150) yjzC 1785604..1785783 (+) 180 WP_003245356.1 YjzC family protein -
  C2H95_RS09185 (C2H95_09155) yjzD 1785829..1786014 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C2H95_RS09190 (C2H95_09160) - 1786263..1786997 (+) 735 WP_003245223.1 hypothetical protein -
  C2H95_RS09195 (C2H95_09165) - 1787079..1787636 (+) 558 WP_125121305.1 hypothetical protein -
  C2H95_RS09200 (C2H95_09170) med 1787727..1788680 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C2H95_RS09205 (C2H95_09175) comZ 1788695..1788886 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C2H95_RS09210 (C2H95_09180) yjzB 1788916..1789152 (-) 237 WP_072173825.1 spore coat protein YjzB -
  C2H95_RS09215 (C2H95_09185) fabH 1789317..1790255 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C2H95_RS09220 (C2H95_09190) fabF 1790278..1791519 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C2H95_RS09225 (C2H95_09195) yjaZ 1791595..1792380 (+) 786 WP_049140720.1 DUF2268 domain-containing protein -
  C2H95_RS09230 (C2H95_09200) appD 1792572..1793558 (+) 987 WP_049140721.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=265694 C2H95_RS09205 WP_003224559.1 1788695..1788886(+) (comZ) [Bacillus subtilis strain PK5_17]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=265694 C2H95_RS09205 WP_003224559.1 1788695..1788886(+) (comZ) [Bacillus subtilis strain PK5_17]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment