Detailed information NTG0265693

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: DLE02_RS04815
• Genome accession: NZ_CP031383
• Coordinates: 992738..993856 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347040.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain LUH 6011
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 987738..998856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLE02_RS04785 (DLE02_00933)	-	988567..989415 (+)	849	WP_000336548.1	class II glutamine amidotransferase	-
DLE02_RS04790 (DLE02_00934)	-	989668..990123 (+)	456	WP_000782976.1	bacteriohemerythrin	-
DLE02_RS04795 (DLE02_00935)	-	990276..991343 (+)	1068	WP_004748097.1	hypothetical protein	-
DLE02_RS04800 (DLE02_00936)	-	991343..991666 (+)	324	WP_000442590.1	RnfH family protein	-
DLE02_RS04805 (DLE02_00937)	-	991721..992119 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
DLE02_RS04810 (DLE02_00938)	fur	992231..992668 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
DLE02_RS04815 (DLE02_00939)	pilU	992738..993856 (-)	1119	WP_000347040.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
DLE02_RS04820 (DLE02_00940)	pilT	993884..994921 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
DLE02_RS04825 (DLE02_00941)	-	995048..995740 (+)	693	WP_004748094.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41896.10 Da
• Isoelectric Point: 6.6406

>NTDB_id=265693 DLE02_RS04815 WP_000347040.1 992738..993856(-) (pilU) [Acinetobacter baumannii strain LUH 6011]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLQSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=265693 DLE02_RS04815 WP_000347040.1 992738..993856(-) (pilU) [Acinetobacter baumannii strain LUH 6011]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCATCGGATCTTTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGACAAATTGTTCCAATTTCAAAAAATAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACAGTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCAGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGCTGCATCATTACTCAGCGTGAGGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACATTACGACAAGCGCCGGATGTCATCTTAATTGGTGAGATTCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCACTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGCCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAGGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (29-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.022	98.925	0.683
pilU	Vibrio cholerae strain A1552	52.973	99.462	0.527
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392