Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C2H95_RS05300 Genome accession   NZ_CP026037
Coordinates   1039975..1040925 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain PK5_17     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1034975..1045925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H95_RS05275 (C2H95_05260) rapC 1036435..1037583 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  C2H95_RS05280 (C2H95_05265) phrC 1037567..1037689 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  C2H95_RS05285 (C2H95_05270) yczM 1037789..1037878 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  C2H95_RS05290 (C2H95_05275) yczN 1037960..1038073 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  C2H95_RS05295 (C2H95_05280) thrD 1038226..1039590 (-) 1365 WP_072173982.1 aspartate kinase -
  C2H95_RS05300 (C2H95_05285) ceuB 1039975..1040925 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  C2H95_RS05305 (C2H95_05290) yclO 1040918..1041865 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  C2H95_RS05310 (C2H95_05295) yclP 1041859..1042617 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  C2H95_RS05315 (C2H95_05300) yclQ 1042639..1043592 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  C2H95_RS05320 (C2H95_05305) ycnB 1043639..1045057 (-) 1419 WP_167568918.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=265683 C2H95_RS05300 WP_014475804.1 1039975..1040925(+) (ceuB) [Bacillus subtilis strain PK5_17]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=265683 C2H95_RS05300 WP_014475804.1 1039975..1040925(+) (ceuB) [Bacillus subtilis strain PK5_17]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCGGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment