Detailed information NTG0265667

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C2H95_RS01220
• Genome accession: NZ_CP026037
• Coordinates: 243217..244362 (+)
• Length: 381 a.a.
• NCBI ID: WP_038829812.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_17
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 238217..249362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H95_RS01200 (C2H95_01175)	albF	238233..239513 (+)	1281	WP_064671459.1	pitrilysin family protein	-
C2H95_RS01205 (C2H95_01180)	albG	239510..240211 (+)	702	WP_249849555.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C2H95_RS01210 (C2H95_01185)	ywhL	240217..241593 (-)	1377	WP_249849556.1	YncE family protein	-
C2H95_RS01215 (C2H95_01190)	ywhK	241632..242987 (-)	1356	WP_249849557.1	YncE family protein	-
C2H95_RS21075 (C2H95_01195)	-	242984..243214 (-)	231	WP_072175635.1	hypothetical protein	-
C2H95_RS01220 (C2H95_01200)	rapF	243217..244362 (+)	1146	WP_038829812.1	response regulator aspartate phosphatase RapF	Regulator
C2H95_RS01225 (C2H95_01205)	phrF	244346..244465 (+)	120	WP_085185514.1	phosphatase RapF inhibitor PhrF	Regulator
C2H95_RS01230 (C2H95_01210)	-	244563..244976 (+)	414	Protein_246	YbaK/EbsC family protein	-
C2H95_RS01235 (C2H95_01215)	speB	245064..245936 (-)	873	WP_003227545.1	agmatinase	-
C2H95_RS01240 (C2H95_01220)	speE	245997..246827 (-)	831	WP_249849558.1	spermidine synthase	-
C2H95_RS01245 (C2H95_01225)	pbpG	247029..249104 (+)	2076	WP_124072632.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45626.14 Da
• Isoelectric Point: 5.2517

>NTDB_id=265667 C2H95_RS01220 WP_038829812.1 243217..244362(+) (rapF) [Bacillus subtilis strain PK5_17]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=265667 C2H95_RS01220 WP_038829812.1 243217..244362(+) (rapF) [Bacillus subtilis strain PK5_17]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAATACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572