Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   C2H93_RS13905 Genome accession   NZ_CP026036
Coordinates   2714108..2716426 (-) Length   772 a.a.
NCBI ID   WP_161621287.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_16     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2709108..2721426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS13865 (C2H93_13865) mrpB 2709575..2710006 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  C2H93_RS13870 (C2H93_13870) mrpC 2710006..2710347 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  C2H93_RS13875 (C2H93_13875) mrpD 2710340..2711821 (+) 1482 WP_043940184.1 Na+/H+ antiporter subunit D -
  C2H93_RS13880 (C2H93_13880) mrpE 2711827..2712303 (+) 477 WP_120028526.1 Na+/H+ antiporter subunit E -
  C2H93_RS13885 (C2H93_13885) mrpF 2712303..2712587 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C2H93_RS13890 (C2H93_13890) mnhG 2712571..2712945 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  C2H93_RS13895 (C2H93_13895) yuxO 2712984..2713364 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  C2H93_RS13900 (C2H93_13900) comA 2713383..2714027 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C2H93_RS13905 (C2H93_13905) comP 2714108..2716426 (-) 2319 WP_161621287.1 sensor histidine kinase Regulator
  C2H93_RS13910 (C2H93_13910) comX 2716446..2716622 (-) 177 WP_041906074.1 competence pheromone ComX -
  C2H93_RS13915 (C2H93_13915) - 2716637..2717494 (-) 858 WP_309248341.1 polyprenyl synthetase family protein -
  C2H93_RS13920 (C2H93_13920) degQ 2717662..2717802 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C2H93_RS13925 - 2718024..2718086 (+) 63 Protein_2724 hypothetical protein -
  C2H93_RS13930 (C2H93_13925) - 2718265..2718633 (+) 369 WP_017695529.1 hypothetical protein -
  C2H93_RS13935 (C2H93_13930) pdeH 2718609..2719838 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 772 a.a.        Molecular weight: 90001.35 Da        Isoelectric Point: 8.6883

>NTDB_id=265639 C2H93_RS13905 WP_161621287.1 2714108..2716426(-) (comP) [Bacillus subtilis strain PK5_16]
MKNLKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHELKVEKMTKATYGKYMGLKEGDLILEVSGKKPTSENV
KRNYLAKAEHLKVKRDNHEIQLHNTEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYIVNILYTLPIINVIIEFIQKYLPSGIITNIS
NINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISNTVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLAL
VYQFVVNKIYDIDFILGRIRYYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRFS
EKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDKQSVEPNWRLYKTEFEKVTKEIG
KIIEINQGFLIKVGEKGTSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVVQIEELMDHLQALKREGANPVWLK
KLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQL
LYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYE
DDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2319 bp        

>NTDB_id=265639 C2H93_RS13905 WP_161621287.1 2714108..2716426(-) (comP) [Bacillus subtilis strain PK5_16]
TTGAAAAACCTTAAAAGAAATTTTTCTATAGTGCTAGTATTATTTAGTCTCTTATATTTTGCTTATATTGTTTATTTCAC
TCAGAATGGTATCTTAGTTGGTACTTATGTTTCTGAAACAGCCAATCATGAGTTAAAAGTTGAAAAAATGACTAAAGCCA
CATATGGAAAATATATGGGCTTAAAAGAAGGCGACTTAATACTCGAGGTAAGTGGGAAGAAACCTACAAGCGAGAATGTT
AAAAGAAATTATTTAGCAAAAGCTGAACATTTAAAAGTTAAAAGGGATAATCATGAAATTCAATTACATAATACGGAGTA
TATCTCTTTAAATAATTCTTATAGCTTTTTCATTTATATTATCCCTTGTATATTTTTTGCTTTGAGTCTGTTATGTGCAT
TTTATATTTATAGGGTCAATCGAGTAAAAAATACGTACTCGGCTTATATTTTGATTAATTTTTTGCTGTTTATATCTATA
GCATATTTAAGTGCTGGAGGCGTAACTAGAGGATATGAAATAAATAGATATATTAATCTTTTTACCTTTTTAAATGTACC
TGTCTTGTATTTGCATTTTCTATATCAATATTTCAAAGAATTAAGCATCAAATTTTCATCACGTTATATCGTGAATATTT
TATACACGTTGCCAATTATCAATGTAATAATAGAGTTCATCCAGAAATACCTTCCTTCGGGGATTATTACGAATATTAGT
AATATCAATTTAGTAACATTCTTAATAGAGATTACAGTTGTTTATTTTTGCATTATCTATTATGGGATAATTTATAGAAA
AAAGGATCATTATTATTTGTTGAAGGTATTATTGATTTCAAATACGGTAGCTTTCTTTCCTTTTACGGTCTTATATATCA
TGCCGGAAGTTTTATTTGGGCAATATATTTACTCAGCAATAGTGACTGCACCATTCTTAATAATTATCCCATTAGCATTG
GTTTATCAATTCGTTGTAAATAAAATTTATGATATAGACTTTATACTAGGCAGAATTAGATATTATAGTTTATTATCCAT
CATACCAACAATAGGCATAGTATGGTTGTCAATAATATTTGATAGCAAAAGAGCGGATTTTAATATCATCTTAATTACGT
TATGTACTTTCATAATTTTCCTGTCGGTCTTTTATATTAAAGAATTACTGGACTATAAATTTCGGTTAAAACGATTTTCG
GAAAAATATAATTATCAAGACAGTATATTTAAATATACGCAATTAATTAAAGGTGTATCAGCTTTAGATCAAGTATTTAA
GAACTTAAAAACAACAATACTAGAAGTTCTACCCGTAAGTAAAGCCTACATCTTTGAAGTTGGTGCTGATAGAGAAATCA
TATACTTTGATAAACAGAGTGTTGAACCCAACTGGAGGCTGTATAAAACAGAATTTGAAAAGGTCACTAAAGAAATAGGG
AAGATTATTGAGATTAACCAAGGCTTTTTGATCAAAGTAGGGGAAAAAGGTACGAGTTCTTATGTATTGCTTTGTTTATC
TAGCATCAATACACCAAGGTTGACAAGAGATGAAATTTCATGGCTGAAAACATTATCGTTTTATACTAGTGTATCCATGG
AAAATGTTGTACAAATTGAAGAACTCATGGATCATTTACAAGCTTTAAAAAGGGAAGGTGCCAACCCCGTATGGCTCAAA
AAACTCATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGAT
TTCCTTAAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACA
AGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTT
CTGTATGATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTT
AAATACCGGCAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTA
ATGCGGTTAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATTAGTATTCAAAACAAAATCGTTCTTCATTATGAG
GACGATGGCGTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGT
CAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

64.424

100

0.645


Multiple sequence alignment