Detailed information NTG0265593

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: DK878_RS10685
• Genome accession: NZ_CP031379
• Coordinates: 2166977..2168071 (+)
• Length: 364 a.a.
• NCBI ID: WP_053866126.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2660
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2161977..2173071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK878_RS10655 (DK878_10970)	-	2162063..2162809 (-)	747	WP_013730689.1	Bro-N domain-containing protein	-
DK878_RS10660 (DK878_10975)	-	2162828..2163055 (-)	228	WP_013730690.1	helix-turn-helix domain-containing protein	-
DK878_RS10665 (DK878_10980)	-	2163209..2163922 (+)	714	WP_013730691.1	helix-turn-helix domain-containing protein	-
DK878_RS10670 (DK878_10985)	-	2164286..2165116 (+)	831	WP_013730692.1	KilA-N domain-containing protein	-
DK878_RS10675 (DK878_10990)	-	2165281..2166453 (+)	1173	WP_013730693.1	site-specific integrase	-
DK878_RS10680 (DK878_10995)	yaaA	2166591..2166974 (+)	384	WP_002936175.1	S4 domain-containing protein YaaA	-
DK878_RS10685 (DK878_11000)	recF	2166977..2168071 (+)	1095	WP_053866126.1	DNA replication/repair protein RecF	Machinery gene
DK878_RS10690 (DK878_11005)	-	2168511..2169713 (-)	1203	WP_009909264.1	IS110-like element ISSsu7 family transposase	-
DK878_RS10695 (DK878_11010)	guaB	2169964..2171445 (-)	1482	WP_014637236.1	IMP dehydrogenase	-
DK878_RS10700 (DK878_11015)	trpS	2171677..2172702 (-)	1026	WP_013730696.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42189.33 Da
• Isoelectric Point: 7.2234

>NTDB_id=265593 DK878_RS10685 WP_053866126.1 2166977..2168071(+) (recF) [Streptococcus suis strain ISU2660]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLT
ELEKCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=265593 DK878_RS10685 WP_053866126.1 2166977..2168071(+) (recF) [Streptococcus suis strain ISU2660]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCAAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAAGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTAGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.784	100	0.445