Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C2H93_RS00430 Genome accession   NZ_CP026036
Coordinates   103365..104315 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 98365..109315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS00405 (C2H93_00390) rapC 99825..100973 (+) 1149 WP_038828432.1 response regulator aspartate phosphatase RapC Regulator
  C2H93_RS00410 (C2H93_00395) phrC 100957..101079 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  C2H93_RS00415 (C2H93_00400) yczM 101179..101268 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  C2H93_RS00420 (C2H93_00405) yczN 101350..101463 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  C2H93_RS00425 (C2H93_00410) thrD 101616..102980 (-) 1365 WP_021481755.1 aspartate kinase -
  C2H93_RS00430 (C2H93_00415) ceuB 103365..104315 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  C2H93_RS00435 (C2H93_00420) yclO 104308..105255 (+) 948 WP_141949511.1 petrobactin ABC transporter permease YclO -
  C2H93_RS00440 (C2H93_00425) yclP 105249..106007 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  C2H93_RS00445 (C2H93_00430) yclQ 106029..106982 (+) 954 WP_046160056.1 petrobactin ABC transporter substrate-binding protein YclQ -
  C2H93_RS00450 (C2H93_00435) ycnB 107029..108447 (-) 1419 WP_120027775.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=265587 C2H93_RS00430 WP_015382768.1 103365..104315(+) (ceuB) [Bacillus subtilis strain PK5_16]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=265587 C2H93_RS00430 WP_015382768.1 103365..104315(+) (ceuB) [Bacillus subtilis strain PK5_16]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCGGCCAGTCCTTTAATCAAAATGCT
GATCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment