Detailed information NTG0265585

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C2H93_RS00405
• Genome accession: NZ_CP026036
• Coordinates: 99825..100973 (+)
• Length: 382 a.a.
• NCBI ID: WP_038828432.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 94825..105973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H93_RS00385 (C2H93_00370)	yclH	95201..95881 (-)	681	WP_041850693.1	ABC transporter ATP-binding protein	-
C2H93_RS00390 (C2H93_00375)	yclI	95897..97357 (-)	1461	WP_249852508.1	ABC transporter permease	-
C2H93_RS00395 (C2H93_00380)	yclJ	97570..98253 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
C2H93_RS00400 (C2H93_00385)	yclK	98240..99661 (+)	1422	WP_080121165.1	two-component system sensor histidine kinase YclK	-
C2H93_RS00405 (C2H93_00390)	rapC	99825..100973 (+)	1149	WP_038828432.1	response regulator aspartate phosphatase RapC	Regulator
C2H93_RS00410 (C2H93_00395)	phrC	100957..101079 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
C2H93_RS00415 (C2H93_00400)	yczM	101179..101268 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
C2H93_RS00420 (C2H93_00405)	yczN	101350..101463 (-)	114	WP_014478831.1	YjcZ family sporulation protein	-
C2H93_RS00425 (C2H93_00410)	thrD	101616..102980 (-)	1365	WP_021481755.1	aspartate kinase	-
C2H93_RS00430 (C2H93_00415)	ceuB	103365..104315 (+)	951	WP_015382768.1	petrobactin ABC transporter permease YclN	Machinery gene
C2H93_RS00435 (C2H93_00420)	yclO	104308..105255 (+)	948	WP_141949511.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.69 Da
• Isoelectric Point: 5.0423

>NTDB_id=265585 C2H93_RS00405 WP_038828432.1 99825..100973(+) (rapC) [Bacillus subtilis strain PK5_16]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMKHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=265585 C2H93_RS00405 WP_038828432.1 99825..100973(+) (rapC) [Bacillus subtilis strain PK5_16]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGAAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568