Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | DK878_RS09085 | Genome accession | NZ_CP031379 |
| Coordinates | 1834870..1835910 (-) | Length | 346 a.a. |
| NCBI ID | WP_013730555.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain ISU2660 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1829870..1840910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK878_RS11035 | - | 1830705..1830822 (-) | 118 | Protein_1757 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| DK878_RS09055 (DK878_09315) | - | 1830840..1831148 (-) | 309 | WP_002942377.1 | YlxQ-related RNA-binding protein | - |
| DK878_RS09060 (DK878_09320) | rnpM | 1831135..1831431 (-) | 297 | WP_002942375.1 | RNase P modulator RnpM | - |
| DK878_RS09065 (DK878_09325) | nusA | 1831448..1832590 (-) | 1143 | WP_004194726.1 | transcription termination factor NusA | - |
| DK878_RS09070 (DK878_09330) | rimP | 1832663..1833133 (-) | 471 | WP_002942369.1 | ribosome maturation factor RimP | - |
| DK878_RS09075 (DK878_09335) | trmB | 1833391..1834029 (-) | 639 | WP_002939002.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| DK878_RS09080 (DK878_09340) | ccrZ | 1834026..1834820 (-) | 795 | WP_013730554.1 | cell cycle regulator CcrZ | - |
| DK878_RS09085 (DK878_09345) | pptB | 1834870..1835910 (-) | 1041 | WP_013730555.1 | ABC transporter permease | Regulator |
| DK878_RS09090 (DK878_09350) | pptA | 1835907..1836641 (-) | 735 | WP_002939204.1 | ABC transporter ATP-binding protein | Regulator |
| DK878_RS09095 (DK878_09355) | - | 1836704..1837117 (+) | 414 | WP_002939203.1 | HIT family protein | - |
| DK878_RS09100 (DK878_09360) | - | 1837119..1837421 (+) | 303 | WP_002939199.1 | hypothetical protein | - |
| DK878_RS09105 (DK878_09365) | - | 1837530..1838723 (-) | 1194 | WP_002939198.1 | LCP family protein | - |
| DK878_RS09110 (DK878_09370) | - | 1838720..1839247 (-) | 528 | WP_002939196.1 | GNAT family N-acetyltransferase | - |
| DK878_RS09115 (DK878_09375) | tsaE | 1839240..1839680 (-) | 441 | WP_024376437.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 40172.54 Da Isoelectric Point: 10.0123
>NTDB_id=265579 DK878_RS09085 WP_013730555.1 1834870..1835910(-) (pptB) [Streptococcus suis strain ISU2660]
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARCTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENT
MVVVLLLVGIFLHEIYLPLKLKKLID
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARCTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENT
MVVVLLLVGIFLHEIYLPLKLKKLID
Nucleotide
Download Length: 1041 bp
>NTDB_id=265579 DK878_RS09085 WP_013730555.1 1834870..1835910(-) (pptB) [Streptococcus suis strain ISU2660]
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTCGTTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGATGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTTGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTTCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTACTGGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATACG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTCGTTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGATGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTTGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTTCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTACTGGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATACG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
45.739 |
100 |
0.465 |
| pptB | Streptococcus thermophilus LMD-9 |
44.886 |
100 |
0.457 |