Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   C2H96_RS16310 Genome accession   NZ_CP026035
Coordinates   3206090..3208390 (+) Length   766 a.a.
NCBI ID   WP_120028527.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_68     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3201090..3213390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS16280 (C2H96_16225) pdeH 3202681..3203910 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C2H96_RS16285 (C2H96_16230) - 3203886..3204254 (-) 369 WP_038828672.1 hypothetical protein -
  C2H96_RS16290 - 3204369..3204494 (-) 126 WP_120028613.1 hypothetical protein -
  C2H96_RS16295 (C2H96_16235) degQ 3204716..3204856 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C2H96_RS16300 (C2H96_16240) - 3205041..3205901 (+) 861 WP_064671628.1 polyprenyl synthetase family protein -
  C2H96_RS16305 (C2H96_16245) comX 3205914..3206078 (+) 165 WP_015384519.1 competence pheromone ComX -
  C2H96_RS16310 (C2H96_16250) comP 3206090..3208390 (+) 2301 WP_120028527.1 histidine kinase Regulator
  C2H96_RS16315 (C2H96_16255) comA 3208471..3209115 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C2H96_RS16320 (C2H96_16260) yuxO 3209134..3209514 (+) 381 WP_014477831.1 hotdog fold thioesterase -
  C2H96_RS16325 (C2H96_16265) mnhG 3209553..3209927 (-) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  C2H96_RS16330 (C2H96_16270) mrpF 3209911..3210195 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C2H96_RS16335 (C2H96_16275) mrpE 3210195..3210671 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  C2H96_RS16340 (C2H96_16280) mrpD 3210677..3212158 (-) 1482 WP_124072774.1 Na+/H+ antiporter subunit D -
  C2H96_RS16345 (C2H96_16285) mrpC 3212151..3212492 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  C2H96_RS16350 (C2H96_16290) mrpB 3212492..3212923 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88543.66 Da        Isoelectric Point: 7.8710

>NTDB_id=265555 C2H96_RS16310 WP_120028527.1 3206090..3208390(+) (comP) [Bacillus subtilis strain PK5_68]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHILKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYQKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=265555 C2H96_RS16310 WP_120028527.1 3206090..3208390(+) (comP) [Bacillus subtilis strain PK5_68]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCGAAAATCAAGACAATGAAGTTGTCATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAAAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAATTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTGGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTTTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATTGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TTTAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGCAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGTTGATTAGGGATTCAACTTCTTTGACCCAAGTATTTGAGGAACTGAAAACCACGAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAATGTATCGATCGAAAACGTCATGAAAATCG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATC
GAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGCAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.908

100

0.593


Multiple sequence alignment