Detailed information NTG0265544

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DK878_RS04935
• Genome accession: NZ_CP031379
• Coordinates: 974280..975350 (+)
• Length: 356 a.a.
• NCBI ID: WP_002935006.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2660
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 969280..980350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK878_RS04910 (DK878_05080)	-	970058..970390 (+)	333	WP_002935001.1	putative DNA-binding protein	-
DK878_RS04915 (DK878_05085)	ffh	970403..971977 (+)	1575	WP_002935002.1	signal recognition particle protein	-
DK878_RS04920 (DK878_05090)	-	972115..972783 (+)	669	WP_002935003.1	SatD family protein	-
DK878_RS04925 (DK878_05095)	-	972787..973527 (+)	741	WP_009909823.1	DUF3307 domain-containing protein	-
DK878_RS04930 (DK878_05100)	-	973593..974114 (+)	522	WP_002935005.1	AAA family ATPase	-
DK878_RS04935 (DK878_05105)	xerS	974280..975350 (+)	1071	WP_002935006.1	tyrosine recombinase XerS	Machinery gene
DK878_RS04940 (DK878_05110)	-	975420..976928 (-)	1509	WP_013730362.1	phosphoglucomutase	-
DK878_RS04945 (DK878_05115)	-	977004..977945 (-)	942	WP_002935009.1	sensor histidine kinase	-
DK878_RS04950 (DK878_05120)	braR	977942..978607 (-)	666	WP_009909826.1	response regulator transcription factor	Regulator
DK878_RS04955 (DK878_05125)	-	978646..978852 (-)	207	WP_370287028.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DK878_RS04960 (DK878_05130)	relB	978893..979132 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41545.71 Da
• Isoelectric Point: 9.2257

>NTDB_id=265544 DK878_RS04935 WP_002935006.1 974280..975350(+) (xerS) [Streptococcus suis strain ISU2660]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=265544 DK878_RS04935 WP_002935006.1 974280..975350(+) (xerS) [Streptococcus suis strain ISU2660]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829