Detailed information NTG0265494

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: DK237_RS10805
• Genome accession: NZ_CP031377
• Coordinates: 2147874..2148968 (+)
• Length: 364 a.a.
• NCBI ID: WP_002936177.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2614
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2142874..2153968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK237_RS10775 (DK237_11085)	-	2142893..2143219 (-)	327	WP_235480697.1	hypothetical protein	-
DK237_RS10780 (DK237_11090)	-	2143730..2144350 (-)	621	WP_043033006.1	Rha family transcriptional regulator	-
DK237_RS10785 (DK237_11095)	-	2144364..2144564 (-)	201	WP_024394573.1	helix-turn-helix transcriptional regulator	-
DK237_RS11095	-	2144786..2145367 (+)	582	WP_043033007.1	helix-turn-helix domain-containing protein	-
DK237_RS10795 (DK237_11105)	-	2146184..2147350 (+)	1167	WP_043033008.1	site-specific integrase	-
DK237_RS10800 (DK237_11110)	yaaA	2147488..2147871 (+)	384	WP_002936175.1	S4 domain-containing protein YaaA	-
DK237_RS10805 (DK237_11115)	recF	2147874..2148968 (+)	1095	WP_002936177.1	DNA replication/repair protein RecF	Machinery gene
DK237_RS10810 (DK237_11120)	-	2149408..2150610 (-)	1203	WP_009909264.1	IS110-like element ISSsu7 family transposase	-
DK237_RS10815 (DK237_11125)	guaB	2150861..2152342 (-)	1482	WP_014637236.1	IMP dehydrogenase	-
DK237_RS10820 (DK237_11130)	trpS	2152574..2153599 (-)	1026	WP_013730696.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42217.34 Da
• Isoelectric Point: 7.2235

>NTDB_id=265494 DK237_RS10805 WP_002936177.1 2147874..2148968(+) (recF) [Streptococcus suis strain ISU2614]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIKLTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=265494 DK237_RS10805 WP_002936177.1 2147874..2148968(+) (recF) [Streptococcus suis strain ISU2614]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCAAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTAGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.083	99.176	0.695
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442