Detailed information NTG0265461

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C2H94_RS08440
• Genome accession: NZ_CP026034
• Coordinates: 1584876..1586021 (+)
• Length: 381 a.a.
• NCBI ID: WP_038829812.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK5_52
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1579876..1591021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H94_RS08420 (C2H94_08355)	albF	1579892..1581172 (+)	1281	WP_064671459.1	pitrilysin family protein	-
C2H94_RS08425 (C2H94_08360)	albG	1581169..1581870 (+)	702	WP_249849555.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
C2H94_RS08430 (C2H94_08365)	ywhL	1581876..1583252 (-)	1377	WP_249849556.1	YncE family protein	-
C2H94_RS08435 (C2H94_08370)	ywhK	1583291..1584646 (-)	1356	WP_249849557.1	YncE family protein	-
C2H94_RS21145 (C2H94_08375)	-	1584643..1584873 (-)	231	WP_072175635.1	hypothetical protein	-
C2H94_RS08440 (C2H94_08380)	rapF	1584876..1586021 (+)	1146	WP_038829812.1	response regulator aspartate phosphatase RapF	Regulator
C2H94_RS08445 (C2H94_08385)	phrF	1586005..1586124 (+)	120	WP_085185514.1	phosphatase RapF inhibitor PhrF	Regulator
C2H94_RS08450 (C2H94_08390)	-	1586222..1586635 (+)	414	Protein_1660	YbaK/EbsC family protein	-
C2H94_RS08455 (C2H94_08395)	speB	1586723..1587595 (-)	873	WP_003227545.1	agmatinase	-
C2H94_RS08460 (C2H94_08400)	speE	1587656..1588486 (-)	831	WP_249849558.1	spermidine synthase	-
C2H94_RS08465 (C2H94_08405)	pbpG	1588688..1590763 (+)	2076	WP_124072632.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45626.14 Da
• Isoelectric Point: 5.2517

>NTDB_id=265461 C2H94_RS08440 WP_038829812.1 1584876..1586021(+) (rapF) [Bacillus subtilis strain PK5_52]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=265461 C2H94_RS08440 WP_038829812.1 1584876..1586021(+) (rapF) [Bacillus subtilis strain PK5_52]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAATACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572