Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C2H91_RS18550 | Genome accession | NZ_CP026030 |
| Coordinates | 3691214..3691549 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain PK3_9 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3686214..3696549
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H91_RS18500 (C2H91_18520) | comGC | 3686232..3686528 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H91_RS18505 (C2H91_18525) | comGD | 3686518..3686949 (+) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C2H91_RS18510 (C2H91_18530) | comGE | 3686933..3687280 (+) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| C2H91_RS18515 (C2H91_18535) | comGF | 3687306..3687689 (+) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C2H91_RS18520 (C2H91_18540) | comGG | 3687690..3688064 (+) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| C2H91_RS18525 (C2H91_18545) | spoIIT | 3688136..3688315 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| C2H91_RS18530 (C2H91_18550) | yqzG | 3688357..3688683 (-) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H91_RS18535 (C2H91_18555) | tapA | 3688954..3689715 (+) | 762 | WP_077671431.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H91_RS18540 (C2H91_18560) | sipW | 3689699..3690271 (+) | 573 | WP_003246088.1 | signal peptidase I | - |
| C2H91_RS18545 (C2H91_18565) | tasA | 3690336..3691121 (+) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H91_RS18550 (C2H91_18570) | sinR | 3691214..3691549 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C2H91_RS18555 (C2H91_18575) | sinI | 3691583..3691756 (-) | 174 | WP_014477323.1 | anti-repressor SinI family protein | Regulator |
| C2H91_RS18560 (C2H91_18585) | yqhG | 3691940..3692734 (-) | 795 | WP_021480015.1 | YqhG family protein | - |
| C2H91_RS18565 (C2H91_18590) | yqhH | 3692755..3694428 (-) | 1674 | WP_032726152.1 | SNF2-related protein | - |
| C2H91_RS18570 (C2H91_18595) | gcvT | 3694870..3695958 (+) | 1089 | WP_249850939.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=265311 C2H91_RS18550 WP_003226345.1 3691214..3691549(-) (sinR) [Bacillus subtilis strain PK3_9]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=265311 C2H91_RS18550 WP_003226345.1 3691214..3691549(-) (sinR) [Bacillus subtilis strain PK3_9]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |