Detailed information NTG0265252

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: C2H91_RS04130
• Genome accession: NZ_CP026030
• Coordinates: 883490..884443 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain PK3_9
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 878490..889443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H91_RS04100 (C2H91_04080)	appD	878612..879598 (-)	987	WP_046160279.1	oligopeptide ABC transporter ATP-binding protein AppD	-
C2H91_RS04105 (C2H91_04085)	yjaZ	879790..880575 (-)	786	WP_249851135.1	DUF2268 domain-containing putative Zn-dependent protease	-
C2H91_RS04110 (C2H91_04090)	fabF	880651..881892 (-)	1242	WP_249851136.1	beta-ketoacyl-ACP synthase II	-
C2H91_RS04115 (C2H91_04095)	fabH	881915..882853 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
C2H91_RS04120 (C2H91_04100)	yjzB	883018..883254 (+)	237	WP_072173825.1	spore coat protein YjzB	-
C2H91_RS04125 (C2H91_04105)	comZ	883284..883475 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
C2H91_RS04130 (C2H91_04110)	med	883490..884443 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
C2H91_RS04135 (C2H91_04115)	-	884534..885091 (-)	558	WP_021479559.1	hypothetical protein	-
C2H91_RS04140 (C2H91_04120)	-	885173..885907 (-)	735	WP_003245223.1	hypothetical protein	-
C2H91_RS04145 (C2H91_04125)	yjzD	886156..886341 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
C2H91_RS04150 (C2H91_04130)	yjzC	886387..886566 (-)	180	WP_003245356.1	YjzC family protein	-
C2H91_RS04155 (C2H91_04135)	argF	886652..887611 (-)	960	WP_021479560.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=265252 C2H91_RS04130 WP_014476425.1 883490..884443(-) (med) [Bacillus subtilis strain PK3_9]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=265252 C2H91_RS04130 WP_014476425.1 883490..884443(-) (med) [Bacillus subtilis strain PK3_9]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997