Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C2H91_RS04125 Genome accession   NZ_CP026030
Coordinates   883284..883475 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PK3_9     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 878284..888475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS04100 (C2H91_04080) appD 878612..879598 (-) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C2H91_RS04105 (C2H91_04085) yjaZ 879790..880575 (-) 786 WP_249851135.1 DUF2268 domain-containing putative Zn-dependent protease -
  C2H91_RS04110 (C2H91_04090) fabF 880651..881892 (-) 1242 WP_249851136.1 beta-ketoacyl-ACP synthase II -
  C2H91_RS04115 (C2H91_04095) fabH 881915..882853 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C2H91_RS04120 (C2H91_04100) yjzB 883018..883254 (+) 237 WP_072173825.1 spore coat protein YjzB -
  C2H91_RS04125 (C2H91_04105) comZ 883284..883475 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C2H91_RS04130 (C2H91_04110) med 883490..884443 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C2H91_RS04135 (C2H91_04115) - 884534..885091 (-) 558 WP_021479559.1 hypothetical protein -
  C2H91_RS04140 (C2H91_04120) - 885173..885907 (-) 735 WP_003245223.1 hypothetical protein -
  C2H91_RS04145 (C2H91_04125) yjzD 886156..886341 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C2H91_RS04150 (C2H91_04130) yjzC 886387..886566 (-) 180 WP_003245356.1 YjzC family protein -
  C2H91_RS04155 (C2H91_04135) argF 886652..887611 (-) 960 WP_021479560.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=265251 C2H91_RS04125 WP_003224559.1 883284..883475(-) (comZ) [Bacillus subtilis strain PK3_9]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=265251 C2H91_RS04125 WP_003224559.1 883284..883475(-) (comZ) [Bacillus subtilis strain PK3_9]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment