Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BS11774_RS18390 Genome accession   NZ_CP026010
Coordinates   3455316..3457046 (-) Length   576 a.a.
NCBI ID   WP_014477300.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3450316..3462046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS18360 (BS11774_18255) - 3450370..3450666 (-) 297 WP_128474048.1 hypothetical protein -
  BS11774_RS18365 - 3450974..3451126 (+) 153 WP_128474049.1 hypothetical protein -
  BS11774_RS18370 (BS11774_18260) yqiG 3451199..3452317 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  BS11774_RS18375 (BS11774_18265) spo0A 3452782..3453585 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  BS11774_RS18385 (BS11774_18275) spoIVB 3453861..3455141 (-) 1281 WP_128474050.1 SpoIVB peptidase -
  BS11774_RS18390 (BS11774_18280) recN 3455316..3457046 (-) 1731 WP_014477300.1 DNA repair protein RecN Machinery gene
  BS11774_RS18395 (BS11774_18285) argR 3457083..3457532 (-) 450 WP_003230265.1 arginine repressor ArgR -
  BS11774_RS18400 (BS11774_18290) yqxC 3457630..3458475 (-) 846 WP_128474051.1 TlyA family RNA methyltransferase -
  BS11774_RS18405 (BS11774_18295) dxs 3458472..3460373 (-) 1902 WP_015384069.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BS11774_RS18410 (BS11774_18300) ispA 3460548..3461438 (-) 891 WP_086344065.1 polyprenyl synthetase family protein -
  BS11774_RS18415 (BS11774_18305) xseB 3461428..3461682 (-) 255 WP_003226409.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64598.45 Da        Isoelectric Point: 4.7411

>NTDB_id=265001 BS11774_RS18390 WP_014477300.1 3455316..3457046(-) (recN) [Bacillus subtilis strain ATCC 11774]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVLDVC
AEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALK
TYQEGYQRYMKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQISNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLKKMSESVSNSYYLLEDATFQMRNMLDELEFDPERLNYIETRLNEIKQLKRKYGATV
EDILEYASKIEEEIDQIENRDSHLQSLKKELDSVGKDVAVEAANVSQIRKTWAKKLADEIHRELKSLYMEKSTFDTEFKV
RTASRNEEAPLVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRVKPLSKQEKVAEIGRMIAGVEVTDLTKR
HAKELLKQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=265001 BS11774_RS18390 WP_014477300.1 3455316..3457046(-) (recN) [Bacillus subtilis strain ATCC 11774]
TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGCGGGCTTACGGTTTT
AACAGGAGAAACCGGAGCCGGCAAATCCATCATCATAGATGCCATTTCTCTTTTAGTCGGAGGCCGCGGATCATCTGAAT
TTGTTAGATATGGGGAAGCAAAAGCCGAACTTGAAGGGCTGTTTCTGTTGGAGAGCGGCCATCCTGTTTTAGATGTATGC
GCTGAGCAGGGAATCGACGTTTCAGACGAAATGATCGTCATGAGAAGGGATATCAGCACGAGCGGGAAAAGCGTTTGCCG
TGTCAATGGCAAGCTTGTCACGATTGCTTCGCTAAGAGAGATCGGCAGGCTTTTATTAGATATTCACGGGCAGCACGATA
ACCAGCTGTTAATGGAAGACGAAAATCATCTCCAGCTTTTGGACAAGTTTGCCGGGGCCGAAGTGGAAAGCGCGCTCAAA
ACGTATCAGGAAGGGTACCAGCGGTATATGAAGCTGCTCAAAAAGCTTAAGCAGCTTTCTGAAAGCGAACAGGAAATGGC
CCATCGTCTTGATCTTATTCAATTTCAGCTCGAAGAAATCGAATCGGCAAAGCTTGAGCTTAACGAAGATGAACAGCTCC
AAGAAGAGCGCCAGCAAATTTCAAACTTTGAGAAGATATATGAGTCGCTGCAAAATGCATATAACGCGCTTCGCAGTGAG
CAGGGCGGATTGGACTGGGTTGGAATGGCATCAGCGCAGCTTGAAGATATATCTGATATTAATGAACCGCTGAAAAAAAT
GTCTGAAAGTGTTTCGAACTCCTACTATTTGCTTGAGGATGCCACATTTCAGATGAGAAATATGCTGGATGAGCTTGAAT
TTGATCCGGAACGCCTGAACTATATTGAGACGCGACTTAATGAAATCAAACAGCTGAAACGAAAATACGGTGCCACTGTT
GAAGACATTTTGGAATATGCTTCTAAAATTGAAGAAGAGATTGACCAAATTGAAAACAGGGACAGCCACCTTCAAAGCTT
GAAAAAGGAGCTTGACTCCGTCGGCAAAGATGTCGCAGTGGAAGCGGCAAATGTGTCACAAATCCGAAAAACATGGGCGA
AAAAGCTGGCTGATGAGATTCATCGGGAATTAAAAAGCCTGTACATGGAAAAATCAACTTTTGATACGGAATTTAAGGTC
AGAACAGCGTCACGCAATGAAGAGGCGCCGCTTGTAAACGGCCAGCCCGTTCAGCTGACTGAACAAGGGATTGACCTGGT
GAAGTTTTTAATTTCAACCAATACAGGCGAGCCACTGAAATCCCTTTCGAAAGTCGCTTCAGGTGGAGAGCTGTCACGGG
TGATGCTTGCCATAAAAAGCATTTTTTCCTCACAACAGGATGTGACATCGATCATTTTTGATGAGGTTGATACCGGTGTA
AGCGGCAGGGTCGCACAGGCAATCGCTGAGAAGATCCATAAGGTGTCAATAGGATCACAAGTGCTGTGCATTACACACCT
GCCTCAGGTGGCTGCCATGGCCGATACGCATCTTTATATTGCGAAGGAGTTAAAAGACGGCAGAACGACGACACGTGTCA
AGCCGCTGTCTAAGCAGGAAAAGGTAGCGGAAATCGGGCGCATGATTGCAGGTGTCGAAGTAACCGACTTAACGAAACGC
CATGCGAAAGAACTTTTAAAACAAGCGGATCAAGTCAAAACAACTGGGTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

99.653

100

0.997

Multiple sequence alignment