Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BS11774_RS18375 Genome accession   NZ_CP026010
Coordinates   3452782..3453585 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3447782..3458585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS18350 (BS11774_18245) glpQB 3448920..3449651 (-) 732 WP_128474047.1 glycerophosphodiester phosphodiesterase -
  BS11774_RS18355 (BS11774_18250) yqiI 3449730..3450350 (-) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  BS11774_RS18360 (BS11774_18255) - 3450370..3450666 (-) 297 WP_128474048.1 hypothetical protein -
  BS11774_RS18365 - 3450974..3451126 (+) 153 WP_128474049.1 hypothetical protein -
  BS11774_RS18370 (BS11774_18260) yqiG 3451199..3452317 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  BS11774_RS18375 (BS11774_18265) spo0A 3452782..3453585 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  BS11774_RS18385 (BS11774_18275) spoIVB 3453861..3455141 (-) 1281 WP_128474050.1 SpoIVB peptidase -
  BS11774_RS18390 (BS11774_18280) recN 3455316..3457046 (-) 1731 WP_014477300.1 DNA repair protein RecN Machinery gene
  BS11774_RS18395 (BS11774_18285) argR 3457083..3457532 (-) 450 WP_003230265.1 arginine repressor ArgR -
  BS11774_RS18400 (BS11774_18290) yqxC 3457630..3458475 (-) 846 WP_128474051.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=265000 BS11774_RS18375 WP_003226427.1 3452782..3453585(-) (spo0A) [Bacillus subtilis strain ATCC 11774]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=265000 BS11774_RS18375 WP_003226427.1 3452782..3453585(-) (spo0A) [Bacillus subtilis strain ATCC 11774]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAAGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment