Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BS11774_RS12245 Genome accession   NZ_CP026010
Coordinates   2332718..2333839 (+) Length   373 a.a.
NCBI ID   WP_250634914.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2327718..2338839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS12210 (BS11774_12160) yjbB 2328147..2329364 (+) 1218 WP_128473813.1 MFS transporter -
  BS11774_RS12215 (BS11774_12165) yjbC 2329529..2330107 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  BS11774_RS12220 (BS11774_12170) spx 2330288..2330683 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  BS11774_RS12225 (BS11774_12175) yjbE 2330938..2331594 (-) 657 WP_014479447.1 TerC family protein -
  BS11774_RS12230 - 2331764..2331904 (+) 141 WP_119122854.1 hypothetical protein -
  BS11774_RS12235 (BS11774_12180) mecA 2331871..2332527 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  BS11774_RS12240 - 2332522..2332644 (-) 123 WP_128473814.1 hypothetical protein -
  BS11774_RS12245 (BS11774_12185) coiA 2332718..2333839 (+) 1122 WP_250634914.1 competence protein CoiA Machinery gene
  BS11774_RS12250 (BS11774_12190) pepF 2334069..2335898 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  BS11774_RS12255 (BS11774_12195) - 2335935..2336102 (-) 168 WP_003244944.1 hypothetical protein -
  BS11774_RS12265 (BS11774_12205) spxH 2336417..2337316 (-) 900 WP_041340381.1 protease adaptor protein SpxH -
  BS11774_RS12270 (BS11774_12210) bhbI 2337313..2337711 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  BS11774_RS12275 (BS11774_12215) cwlQ 2337966..2338700 (-) 735 WP_043857282.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43790.81 Da        Isoelectric Point: 10.0536

>NTDB_id=264988 BS11774_RS12245 WP_250634914.1 2332718..2333839(+) (coiA) [Bacillus subtilis strain ATCC 11774]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGSVFKSPVFVWQGFLYLFMTDLGDKRAPIHFSAVLQQCKLHIHKKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFVE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=264988 BS11774_RS12245 WP_250634914.1 2332718..2333839(+) (coiA) [Bacillus subtilis strain ATCC 11774]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGTTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAGACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGTC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGATAAACGTGCGCCAA
TTCATTTCTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAAAAAGAACATTGCACTCAGGTTCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACATTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTGTAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.855

100

0.979


Multiple sequence alignment