Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   BS11774_RS03775 Genome accession   NZ_CP026010
Coordinates   720828..720947 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain ATCC 11774     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 715828..725947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS03750 (BS11774_03730) albG 715992..716693 (+) 702 WP_042975445.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  BS11774_RS03755 (BS11774_03735) ywhL 716699..718075 (-) 1377 WP_128473364.1 YncE family protein -
  BS11774_RS03760 (BS11774_03740) ywhK 718114..719469 (-) 1356 WP_128473365.1 YncE family protein -
  BS11774_RS22345 (BS11774_03745) - 719466..719696 (-) 231 WP_033883387.1 hypothetical protein -
  BS11774_RS03770 (BS11774_03750) rapF 719699..720844 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  BS11774_RS03775 (BS11774_03755) phrF 720828..720947 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  BS11774_RS03780 (BS11774_03760) - 721061..721511 (+) 451 Protein_721 YbaK/EbsC family protein -
  BS11774_RS03785 (BS11774_03765) speB 721543..722415 (-) 873 WP_095844026.1 agmatinase -
  BS11774_RS03790 (BS11774_03770) speE 722476..723306 (-) 831 WP_003227543.1 spermidine synthase -
  BS11774_RS03795 (BS11774_03775) pbpG 723508..725583 (+) 2076 WP_128473366.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=264959 BS11774_RS03775 WP_009968329.1 720828..720947(+) (phrF) [Bacillus subtilis strain ATCC 11774]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=264959 BS11774_RS03775 WP_009968329.1 720828..720947(+) (phrF) [Bacillus subtilis strain ATCC 11774]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment