Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | CYK57_RS07940 | Genome accession | NZ_CP026009 |
| Coordinates | 1711293..1711637 (+) | Length | 114 a.a. |
| NCBI ID | WP_005599904.1 | Uniprot ID | A3N254 |
| Organism | Actinobacillus pleuropneumoniae strain App6 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1706293..1716637
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYK57_RS07915 (CYK57_01614) | rpsL | 1706425..1706799 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| CYK57_RS07920 (CYK57_01615) | rfaC | 1706921..1707880 (-) | 960 | WP_011848582.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| CYK57_RS07925 (CYK57_01616) | waaF | 1707956..1708993 (-) | 1038 | WP_009875545.1 | lipopolysaccharide heptosyltransferase II | - |
| CYK57_RS07930 (CYK57_01617) | - | 1709075..1709479 (-) | 405 | WP_005599908.1 | MliC family protein | - |
| CYK57_RS07935 (CYK57_01618) | - | 1709601..1710992 (-) | 1392 | WP_005605242.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| CYK57_RS07940 (CYK57_01619) | comEA/comE1 | 1711293..1711637 (+) | 345 | WP_005599904.1 | ComEA family DNA-binding protein | Machinery gene |
| CYK57_RS07945 (CYK57_01620) | asd | 1711788..1712681 (+) | 894 | WP_005612934.1 | archaetidylserine decarboxylase | - |
| CYK57_RS07950 (CYK57_01621) | gshAB | 1712837..1715110 (+) | 2274 | WP_009875544.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| CYK57_RS07955 (CYK57_01622) | - | 1715202..1715822 (-) | 621 | WP_011848583.1 | MerR family transcriptional regulator | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12446.30 Da Isoelectric Point: 10.2030
>NTDB_id=264938 CYK57_RS07940 WP_005599904.1 1711293..1711637(+) (comEA/comE1) [Actinobacillus pleuropneumoniae strain App6]
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPVVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
MKKFARFSISFIIALLSADSIAKPNNPPVSEPTPVVQQMTTTNKTADKQNQVNINTADAAEIKSKLVGIGEKKAQAIVDY
RTKNGAFITIEQLTEVSGIGKATLEKNRERITLE
Nucleotide
Download Length: 345 bp
>NTDB_id=264938 CYK57_RS07940 WP_005599904.1 1711293..1711637(+) (comEA/comE1) [Actinobacillus pleuropneumoniae strain App6]
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCGTAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
ATGAAAAAATTTGCCCGATTTAGTATTAGCTTCATCATTGCATTGTTATCCGCCGATTCAATCGCAAAGCCTAATAATCC
GCCCGTTTCCGAACCGACTCCCGTAGTTCAACAAATGACAACAACGAACAAAACTGCCGATAAACAAAATCAAGTGAATA
TCAATACGGCGGATGCAGCGGAAATTAAATCCAAACTGGTGGGAATCGGTGAGAAAAAAGCACAAGCGATTGTCGATTAC
CGCACTAAAAACGGTGCTTTTATTACGATAGAACAACTAACGGAAGTCTCCGGAATCGGTAAAGCGACACTAGAGAAAAA
TCGCGAACGCATCACGTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.261 |
100 |
0.588 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
47.115 |
91.228 |
0.43 |