Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   DV163_RS03630 Genome accession   NZ_CP031330
Coordinates   610495..611115 (-) Length   206 a.a.
NCBI ID   WP_002225360.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M21955     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 605495..616115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV163_RS03595 dut 605718..606170 (-) 453 WP_002225353.1 dUTP diphosphatase -
  DV163_RS03600 - 606370..606735 (+) 366 Protein_593 AzlC family ABC transporter permease -
  DV163_RS03615 pilX 608507..608980 (-) 474 WP_002225356.1 PilX family type IV pilin Machinery gene
  DV163_RS03620 pilK 608985..609578 (-) 594 WP_002244085.1 pilus assembly protein Machinery gene
  DV163_RS03625 pilJ 609557..610498 (-) 942 WP_002244084.1 PilW family protein Machinery gene
  DV163_RS03630 pilV 610495..611115 (-) 621 WP_002225360.1 type IV pilus modification protein PilV Regulator
  DV163_RS03635 pilH 611139..611807 (-) 669 WP_002230433.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DV163_RS03645 dnaB 612116..613522 (-) 1407 WP_002225362.1 replicative DNA helicase -
  DV163_RS03655 - 613686..614273 (+) 588 WP_002220670.1 superoxide dismutase -
  DV163_RS03665 - 614790..615299 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  DV163_RS03670 - 615631..615963 (-) 333 WP_002225363.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 22325.27 Da        Isoelectric Point: 4.9868

>NTDB_id=264460 DV163_RS03630 WP_002225360.1 610495..611115(-) (pilV) [Neisseria meningitidis strain M21955]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHTLPHTLSAVDGDFAIDAMKTKGQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDN
KANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 621 bp        

>NTDB_id=264460 DV163_RS03630 WP_002225360.1 610495..611115(-) (pilV) [Neisseria meningitidis strain M21955]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATACACTACCGCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATGAA
AACTAAGGGGCAATTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAAT
AAGGCAAACGGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCT
TGAGGTGAGCGGCGACAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

98.544

100

0.985
  pilV/pilI Neisseria gonorrhoeae MS11

83.01

100

0.83