Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   DV445_RS12245 Genome accession   NZ_CP031255
Coordinates   2416960..2417658 (+) Length   232 a.a.
NCBI ID   WP_114922537.1    Uniprot ID   -
Organism   Neisseria elongata strain M15910     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2411960..2422658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV445_RS12215 - 2411988..2413142 (+) 1155 WP_114922534.1 class I SAM-dependent methyltransferase -
  DV445_RS12230 - 2413536..2414372 (+) 837 WP_114922535.1 alpha/beta hydrolase -
  DV445_RS12235 comM 2414415..2415917 (-) 1503 WP_107885144.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  DV445_RS12240 - 2416148..2416933 (+) 786 WP_114922536.1 SPOR domain-containing protein -
  DV445_RS12245 dsbA2 2416960..2417658 (+) 699 WP_114922537.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV445_RS12250 - 2417884..2418537 (-) 654 WP_114922538.1 hypothetical protein -
  DV445_RS12255 - 2418708..2419400 (-) 693 WP_114922539.1 hypothetical protein -
  DV445_RS12260 - 2419632..2420855 (+) 1224 WP_114922732.1 aspartate kinase -
  DV445_RS12265 - 2420936..2421364 (-) 429 WP_114922540.1 EamA family transporter -
  DV445_RS12270 - 2421403..2421921 (-) 519 WP_240318160.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25422.47 Da        Isoelectric Point: 9.7391

>NTDB_id=263825 DV445_RS12245 WP_114922537.1 2416960..2417658(+) (dsbA2) [Neisseria elongata strain M15910]
MKTKHTLLAGVLALALAASAQAELVEGKDYTVLSKPLPQLQSGKIEVTEFFGYFCIHCYHLEPVMQKHSKKWASDTYLRP
LHVVWQPEMIGLARVAAAVNSSNMKYQANLPIFRAFYEEKINLADSATFKKWAAAQTSFDGAKLIAAYDSFGNQAQAKQM
ADLTVEMNIEGTPTVIVGGKYMMRFAGNDWNVSMNKVDEMIAKVRQERGMKAPAAKAAIGNTGAAIAKAANK

Nucleotide


Download         Length: 699 bp        

>NTDB_id=263825 DV445_RS12245 WP_114922537.1 2416960..2417658(+) (dsbA2) [Neisseria elongata strain M15910]
GTGAAAACAAAACATACCCTGTTGGCCGGCGTACTGGCCTTAGCCTTAGCCGCCTCTGCACAAGCCGAATTAGTTGAAGG
CAAGGACTACACCGTCCTCAGCAAACCCTTACCCCAACTCCAAAGCGGCAAAATCGAAGTAACCGAATTTTTCGGCTATT
TCTGCATCCACTGCTACCACCTCGAACCCGTCATGCAGAAACACAGCAAGAAATGGGCTTCCGACACCTACCTGCGCCCG
CTACACGTTGTTTGGCAACCCGAAATGATCGGCTTGGCACGCGTGGCGGCTGCCGTAAACAGCAGCAACATGAAATATCA
GGCCAATCTGCCGATATTCCGCGCCTTCTACGAAGAAAAAATCAACTTGGCCGACAGTGCCACCTTTAAAAAATGGGCGG
CGGCGCAAACTTCTTTCGACGGTGCGAAACTGATTGCCGCCTACGATTCTTTCGGCAACCAGGCGCAAGCCAAACAAATG
GCCGACCTGACCGTTGAAATGAATATAGAAGGGACGCCTACCGTAATTGTCGGCGGCAAATACATGATGCGTTTTGCGGG
CAACGACTGGAACGTCTCCATGAACAAAGTGGATGAAATGATTGCCAAAGTACGCCAAGAACGCGGCATGAAAGCACCGG
CAGCCAAAGCCGCTATCGGCAACACCGGTGCCGCCATCGCCAAAGCGGCCAACAAATAA

Domains

Predicted by InterProScan.

DSBA-like thioredoxin domain (DSBA)

(89-183)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

54.839

80.172

0.44
  dsbA1 Neisseria meningitidis MC58

54.545

80.603

0.44