Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C1H71_RS08060 Genome accession   NZ_CP025781
Coordinates   1812756..1813139 (-) Length   127 a.a.
NCBI ID   WP_130106087.1    Uniprot ID   A0A7G3G8R5
Organism   Iodobacter fluviatilis strain PCH194     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1807756..1818139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C1H71_RS08045 (C1H71_08120) - 1809368..1811536 (-) 2169 WP_130106084.1 methyl-accepting chemotaxis protein -
  C1H71_RS08050 (C1H71_08125) - 1811704..1812219 (-) 516 WP_130106085.1 chemotaxis protein CheW -
  C1H71_RS08055 (C1H71_08130) - 1812318..1812674 (-) 357 WP_188053727.1 response regulator -
  C1H71_RS08060 (C1H71_08135) pilG 1812756..1813139 (-) 384 WP_130106087.1 PleD family two-component system response regulator Regulator
  C1H71_RS08065 (C1H71_08140) yihA 1813479..1814144 (-) 666 WP_130106088.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  C1H71_RS08070 (C1H71_08145) - 1814252..1814881 (+) 630 WP_130106089.1 cytochrome c -
  C1H71_RS08075 (C1H71_08150) - 1815044..1817053 (+) 2010 WP_130106090.1 cytochrome c biogenesis protein ResB -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14142.54 Da        Isoelectric Point: 7.8206

>NTDB_id=263742 C1H71_RS08060 WP_130106087.1 1812756..1813139(-) (pilG) [Iodobacter fluviatilis strain PCH194]
MSKLAGIKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKISDRLPDVIFVDVMMPRLDGYQTCSLIKKNPRYKM
TPVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLQAVSAHIRLD

Nucleotide


Download         Length: 384 bp        

>NTDB_id=263742 C1H71_RS08060 WP_130106087.1 1812756..1813139(-) (pilG) [Iodobacter fluviatilis strain PCH194]
ATGTCAAAGCTCGCCGGAATAAAAGTCATGGTGATTGATGACAGCAATACCATACGTAGGAGTGCTGAAATATTTCTTGG
TCAAGCAGGGTGTGAGGTTATTCTGGCCGAAGATGGCTTTGATGCTTTGGCCAAAATCAGTGATCGCTTGCCTGATGTGA
TTTTTGTTGATGTCATGATGCCAAGGCTAGATGGCTACCAAACTTGCTCGCTGATTAAAAAGAATCCACGTTATAAAATG
ACGCCCGTTATCATGTTGTCTTCTAAAGATGGTTTATTTGATCGTGCTAGGGGCCGAATGGTGGGCTCTGACGAGTATTT
GACTAAGCCTTTTACCAAAGATAGCCTACTGCAGGCTGTTAGTGCACATATCAGGCTTGATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G3G8R5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.942

95.276

0.638
  vicR Streptococcus mutans UA159

39.831

92.913

0.37

Multiple sequence alignment