Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   DV446_RS10035 Genome accession   NZ_CP031252
Coordinates   1968449..1969147 (-) Length   232 a.a.
NCBI ID   WP_074895340.1    Uniprot ID   -
Organism   Neisseria elongata strain M15911     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1963449..1974147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV446_RS10010 - 1964187..1964705 (+) 519 WP_003774021.1 thioredoxin family protein -
  DV446_RS10015 - 1964745..1965173 (+) 429 WP_074895346.1 EamA family transporter -
  DV446_RS10020 - 1965252..1966475 (-) 1224 WP_074895672.1 aspartate kinase -
  DV446_RS10025 - 1966707..1967399 (+) 693 WP_074895344.1 hypothetical protein -
  DV446_RS10030 - 1967570..1968223 (+) 654 WP_074895342.1 hypothetical protein -
  DV446_RS10035 dsbA2 1968449..1969147 (-) 699 WP_074895340.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV446_RS10040 - 1969174..1969950 (-) 777 WP_074895338.1 SPOR domain-containing protein -
  DV446_RS10045 - 1970181..1971035 (+) 855 Protein_1922 YifB family Mg chelatase-like AAA ATPase -
  DV446_RS10050 - 1971087..1972778 (+) 1692 WP_074895334.1 hypothetical protein -
  DV446_RS10055 - 1972912..1973595 (+) 684 Protein_1924 IS5 family transposase -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25504.59 Da        Isoelectric Point: 9.8477

>NTDB_id=263692 DV446_RS10035 WP_074895340.1 1968449..1969147(-) (dsbA2) [Neisseria elongata strain M15911]
MKTKHTLLAGVLALAFAASAQAELVEGKDYTVLSKPLPQLQSSKIEVTEFFGYFCVHCYHLEPVMQKHSKKWASDTYLRP
LHVVWQPEMMGLARVAAAVNSSNMKYQANLPIFRAFYEEKINLADSATFKKWAAAQTSFDGAKLIAAYDSFGNQAQAKQM
ADLTVEMNIEGTPTVIVGGKYMMRFAGNDWNVSMKKVDEMIAKVRQERGMKAPAAKAAIGNTGAAIAKAANK

Nucleotide


Download         Length: 699 bp        

>NTDB_id=263692 DV446_RS10035 WP_074895340.1 1968449..1969147(-) (dsbA2) [Neisseria elongata strain M15911]
GTGAAAACAAAACATACCCTGTTGGCCGGCGTACTGGCTCTAGCATTTGCTGCCTCTGCACAAGCCGAATTGGTTGAAGG
CAAAGACTACACCGTCCTCAGCAAACCCTTACCCCAACTCCAAAGCAGCAAAATCGAAGTAACCGAATTCTTCGGCTATT
TCTGCGTCCACTGCTACCACCTCGAACCCGTCATGCAGAAACACAGCAAGAAATGGGCTTCCGACACCTACCTGCGCCCG
CTGCACGTCGTTTGGCAACCCGAAATGATGGGCTTGGCCCGCGTAGCGGCGGCTGTAAACAGCAGCAACATGAAATATCA
GGCCAATCTGCCGATATTCCGCGCCTTCTACGAAGAAAAAATCAACTTGGCTGACAGCGCGACCTTTAAAAAATGGGCAG
CTGCGCAAACTTCTTTCGACGGTGCGAAACTGATTGCCGCCTATGATTCTTTCGGCAACCAGGCTCAAGCCAAACAAATG
GCCGACCTAACCGTTGAAATGAATATAGAAGGGACGCCTACCGTAATTGTCGGCGGCAAATACATGATGCGTTTTGCAGG
CAACGACTGGAACGTCTCCATGAAAAAAGTAGACGAAATGATTGCCAAAGTACGCCAAGAACGCGGTATGAAAGCACCGG
CAGCCAAAGCCGCCATCGGCAACACCGGCGCCGCCATTGCCAAAGCAGCCAACAAATAA

Domains

Predicted by InterProScan.

DSBA-like thioredoxin domain (DSBA)

(90-183)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

54.301

80.172

0.435
  dsbA1 Neisseria meningitidis MC58

53.476

80.603

0.431