Detailed information NTG0026349

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SSA_RS11625
• Genome accession: NC_009009
• Coordinates: 2374348..2375442 (+)
• Length: 364 a.a.
• NCBI ID: WP_011837724.1
• Uniprot ID: A3CRC5
• Organism: Streptococcus sanguinis SK36
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2369348..2380442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSA_RS11600 (SSA_2368)	pgsA	2369773..2370312 (-)	540	WP_011837720.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SSA_RS11605 (SSA_2369)	rodZ	2370329..2371183 (-)	855	WP_011837721.1	cytoskeleton protein RodZ	-
SSA_RS11610 (SSA_2370)	yfmH	2371217..2372512 (-)	1296	WP_011837722.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SSA_RS11615 (SSA_2371)	yfmF	2372512..2373759 (-)	1248	WP_317627783.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SSA_RS11620 (SSA_2372)	yaaA	2373947..2374345 (+)	399	WP_002894275.1	S4 domain-containing protein YaaA	-
SSA_RS11625 (SSA_2373)	recF	2374348..2375442 (+)	1095	WP_011837724.1	DNA replication/repair protein RecF	Machinery gene
SSA_RS11630 (SSA_2374)	guaB	2375624..2377105 (-)	1482	WP_011837725.1	IMP dehydrogenase	-
SSA_RS11635 (SSA_2375)	trpS	2377311..2378336 (-)	1026	WP_011837726.1	tryptophan--tRNA ligase	-
SSA_RS11640 (SSA_2376)	-	2378626..2380248 (+)	1623	WP_033179248.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42042.40 Da
• Isoelectric Point: 8.6711

>NTDB_id=26349 SSA_RS11625 WP_011837724.1 2374348..2375442(+) (recF) [Streptococcus sanguinis SK36]
MWLQSLKIKHFRNYQEADIDFHPGLNVFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIHFTENDLLVSGILEKKTGK
VPLDINLTPKGRITKVNHLKQSKLSDYIGTMNVVLFAPEDIQLIKGSPSLRRKFIDIELGQIKPVYLSDLSNYNHVLKQR
NAYLKANDKVDETFLTVLDEQLVDYGCRVIRHRLDFLQKLESFAQDKHWDISQNLEKLTVKYLSSIPLHQIDNLEETYRF
SLIISRKRDLFKKNTGVGPHRDDIAFFINQMDANFGSQGQHRSLVLSLKLAEIKLIESITKETPILLLDDVMSELDNSRQ
LKLLETISQDIQTFITTTTLEHLKNLPQDIKIFTIQQGQIMSQS

Nucleotide

• Length: 1095 bp

>NTDB_id=26349 SSA_RS11625 WP_011837724.1 2374348..2375442(+) (recF) [Streptococcus sanguinis SK36]
ATGTGGCTGCAATCATTAAAAATCAAGCATTTCCGAAATTATCAGGAAGCTGATATTGACTTCCATCCTGGCTTAAATGT
CTTTCTAGGCCAGAACGCACAAGGTAAAACCAATATTTTAGAAGCTATTTATTTCCTAGCCTTAACAAGAAGCCACCGTA
CACGCTCAGATAAGGATCTGATTCATTTTACAGAAAATGACCTCCTTGTTTCTGGTATCTTAGAAAAAAAGACTGGTAAA
GTTCCCCTTGACATTAACTTGACACCAAAAGGTCGCATCACAAAAGTCAACCACTTGAAACAAAGTAAATTATCAGACTA
CATTGGAACTATGAATGTTGTCCTGTTTGCTCCTGAAGATATACAGCTGATTAAAGGTTCTCCCAGTCTACGCCGTAAAT
TTATAGACATTGAACTCGGACAAATCAAGCCAGTCTATCTATCAGATTTATCCAATTACAACCATGTCCTCAAACAACGC
AATGCCTATCTGAAAGCTAATGATAAAGTTGATGAAACCTTCTTGACTGTCCTTGATGAGCAGCTGGTTGACTATGGCTG
TCGTGTAATTAGGCATCGGTTGGATTTTTTGCAAAAATTAGAAAGCTTTGCCCAAGACAAGCACTGGGACATCTCTCAAA
ATTTGGAAAAATTGACTGTCAAGTATCTGTCATCTATTCCTTTACACCAAATTGACAATTTAGAAGAAACTTACCGCTTT
TCCTTAATAATCAGCCGTAAACGCGACCTATTCAAAAAAAATACAGGTGTTGGTCCCCATCGTGATGATATTGCTTTTTT
TATCAATCAAATGGATGCCAACTTTGGTAGTCAAGGTCAGCATCGCAGTCTTGTTTTATCACTGAAACTAGCCGAAATCA
AGTTAATAGAAAGCATTACAAAGGAGACCCCTATTTTGTTGCTTGACGATGTAATGAGCGAACTTGACAATAGCCGTCAA
CTAAAATTATTAGAAACTATCTCTCAGGATATTCAAACTTTCATTACTACAACAACTTTAGAACATTTAAAAAATCTTCC
ACAAGATATTAAAATTTTCACCATTCAGCAAGGACAAATCATGTCTCAATCCTAG

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A3CRC5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.423	98.626	0.714
recF	Bacillus subtilis subsp. subtilis str. 168	43.784	100	0.445