Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   C0119_RS04155 Genome accession   NZ_CP025618
Coordinates   840905..845404 (+) Length   1499 a.a.
NCBI ID   WP_108675426.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain SGAir0122     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 835905..850404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0119_RS04130 (C0119_03280) - 836327..836986 (-) 660 WP_048882366.1 hypothetical protein -
  C0119_RS04135 (C0119_03275) pilG 837294..837677 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  C0119_RS04140 (C0119_03270) - 837708..838076 (+) 369 WP_004814764.1 response regulator -
  C0119_RS04145 (C0119_03265) - 838082..838618 (+) 537 WP_108675428.1 chemotaxis protein CheW -
  C0119_RS04150 (C0119_03260) - 838664..840736 (+) 2073 WP_108675427.1 methyl-accepting chemotaxis protein -
  C0119_RS04155 (C0119_03255) chpA 840905..845404 (+) 4500 WP_108675426.1 Hpt domain-containing protein Regulator
  C0119_RS04160 (C0119_03250) - 845408..845869 (+) 462 WP_008307514.1 hypothetical protein -
  C0119_RS04165 (C0119_03245) dapE 845943..847079 (-) 1137 WP_103799652.1 succinyl-diaminopimelate desuccinylase -
  C0119_RS04170 (C0119_03240) - 847204..847353 (-) 150 WP_108675425.1 entericidin A/B family lipoprotein -
  C0119_RS04175 (C0119_03235) - 847491..848339 (-) 849 WP_108675424.1 DUF1853 family protein -
  C0119_RS04180 (C0119_03230) - 848428..848823 (+) 396 WP_004891798.1 YbaN family protein -
  C0119_RS04185 (C0119_03225) elsL 848828..849334 (+) 507 WP_108675423.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1499 a.a.        Molecular weight: 166913.70 Da        Isoelectric Point: 4.2451

>NTDB_id=263051 C0119_RS04155 WP_108675426.1 840905..845404(+) (chpA) [Acinetobacter schindleri strain SGAir0122]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNALLPQWFATPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSIKLTPVIQKFAQATLNIYQYILYPCFKQVQPLTIDLRPVVLLGQQLQQQLSPEPALEELLLL
ADNLTAEGQLTGLELADTAKADSSGVEIAETATAERVEVAEERTDLEETVAIFVEEAEEHLATIHDFLKHENSAKQDYNG
LIRALHTLRGSSSMAQIDDICEASVKVENLFKTLVQDEIASTSKETALLQQYSEFIGDYLHLLKQGNTEKLAGISATFED
AWDTYGFTVTEQQDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPDYIEALSQQAAELMVHTDNRASIGIHEFASQ
LKAAYDALLARPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFATDKVVETEVPA
PVESDISTAVDFTGLSQRIAADRQQQDAEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENTHSLNNLMRYLHT
LKGGANMIAATHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDDKIDYPAPEAIHMLQNIQALVT
GTATATPVAAVETVEAETSVELEVIDDASESAEIVAESQALERVDSFETESVPASDEQIQEDQSGETLTAESAESMLADE
DDLQSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESAFEQFAVHHF
NSNAYDSLLQKTLKWLGQAIFDHDYNGFEQIKAALDAIEFVDVTAQLPERLTKTESLEITTGFEFVQGDGTEPPNMMGEW
AENTSSDSSNEMIRISAELVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQ
RIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQGTDVIIS
FSDDGKGIDAESIRAKAISLGLIKAEQQVDQEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHVSVNSELG
KGTTFTIRVPTTVAVSDALMVKAGDQQFAISLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFVSNQPIPR
LNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKPIGQQFASVGVIAGATILGDGQVCLILDGQNIARQVQATQRI
KQLSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVIN
LVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=263051 C0119_RS04155 WP_108675426.1 840905..845404(+) (chpA) [Acinetobacter schindleri strain SGAir0122]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACAACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATGCTTTATTGCCACAGTGGTTTGCCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCATTTCCATACGCTGAAAGGTTCGGGTCGTATGGTCGGTGCGAAGCAGGCG
GGTGAAATTGCCTGGGCAGTTGAAGATACTTTGAACCGTGTACTTTCAGGTTCAATCAAATTAACACCAGTCATTCAGAA
GTTTGCGCAAGCAACTTTAAATATCTATCAATATATATTGTATCCATGCTTTAAGCAGGTACAGCCATTAACCATTGATT
TACGTCCAGTCGTACTTTTAGGACAACAATTACAACAGCAATTGAGTCCAGAACCGGCACTTGAAGAATTATTGCTACTT
GCGGACAATCTGACTGCTGAAGGTCAGCTAACAGGTCTTGAGCTTGCGGATACTGCAAAAGCAGATTCATCAGGAGTAGA
GATTGCTGAAACTGCTACCGCAGAACGAGTAGAAGTTGCTGAAGAACGTACTGACCTTGAAGAAACGGTGGCGATCTTTG
TTGAAGAAGCCGAGGAACATCTTGCGACAATCCATGATTTCCTAAAACATGAAAATAGTGCCAAGCAAGACTATAATGGC
CTGATTCGTGCATTGCATACCCTGCGTGGCAGCTCTTCTATGGCACAAATTGATGATATCTGTGAAGCCAGCGTTAAAGT
AGAGAATTTATTTAAAACGCTGGTTCAGGATGAAATTGCTTCAACTTCCAAAGAAACAGCACTATTACAGCAATATTCAG
AATTTATCGGTGATTATTTACATCTATTGAAACAGGGTAACACTGAAAAGCTGGCAGGGATTTCTGCTACTTTTGAGGAT
GCCTGGGATACTTATGGTTTTACTGTGACTGAACAGCAGGATGCTGATCAATCTCAAGGTATGGTTACACGTCTGGTTGA
ACTGAATATTGATCAGTTACTGGATGCCGAATTTGAGTTTGATAAGCGGGTACTTGAAGAATATCCAGATTATATTGAAG
CTTTAAGCCAGCAAGCCGCAGAGCTGATGGTACATACGGATAACCGTGCATCGATCGGTATTCATGAATTCGCATCCCAG
TTAAAAGCAGCTTATGATGCTTTGCTGGCGAGACCGGTCTTGCTTGAAAGTGATTATGCCTTTGAACTTTTTGCACAGGC
ACACCAGGAATTTATTCACCTGTTCGATACGCTCGCGGCAGGACAGCGGGTGATTTTGAATGCCGAAGTTGAAAAACTTC
TGGCGGATCTGTCTGCCTTTGTACAGCAAGACATCGAAGTATTCGCTACAGACAAAGTTGTTGAAACTGAGGTACCTGCG
CCAGTAGAGTCGGATATATCCACAGCAGTTGATTTTACTGGGCTCAGCCAGCGTATTGCAGCTGATCGTCAGCAGCAGGA
CGCTGAAGATGCCAACCGTGATTTCGATGAAGACTTGCTGGATATCTTCCTGGAAGAAGCAGATGAGTTGCTGGCAGGCA
TTGATGAAGACCTGAATACCTGGTCCAAAGAACCTGAAAATACCCACTCATTGAACAATCTGATGCGTTATTTGCATACC
CTGAAGGGGGGTGCAAACATGATTGCTGCCACGCATATCGGTTCGATTGCACATGAGCTGGAAAGTATTTATGAGCGCGT
GATCCGTCAGCAGATTACCGTAACACCTGCATTGATCCAGATTATCCGCCTGGTACAGGATAACGTGTCAGACCGTATCC
AGAGTATTCGTGATGATAAGATTGATTATCCGGCACCTGAAGCTATTCATATGCTGCAAAATATCCAGGCACTTGTGACT
GGAACAGCTACTGCAACTCCGGTAGCTGCTGTTGAGACGGTAGAAGCAGAGACTTCTGTAGAACTAGAAGTTATTGACGA
TGCATCGGAATCTGCTGAGATCGTTGCGGAATCACAAGCGCTTGAGCGAGTAGACAGCTTTGAAACTGAATCTGTTCCTG
CATCAGATGAGCAAATTCAGGAAGATCAGTCAGGCGAAACACTTACGGCTGAGTCAGCTGAATCTATGCTCGCTGATGAA
GATGATCTGCAATCGATTGTTGAAGAAACCTTCCTGGAAGAATCGCAAGAGATTCTGGAAAATGCAGAAAAATTACTGAA
CCAATGGTTCGATCAGCGAAGTGACCGTAGCTTATTGCTGCAACTTCAGCGTGCTGCCCACAGTATCAAGGGTGGCGCCC
GCATGATCAGCAATGAAAGCATCGCAAGTATTGCTTATGGTCTGGAAAGTGCATTTGAACAGTTTGCTGTTCATCACTTT
AACTCCAATGCCTATGACAGTCTGCTGCAAAAGACCCTAAAATGGCTGGGTCAAGCCATTTTTGATCATGATTACAATGG
TTTTGAGCAAATCAAAGCAGCGCTGGATGCGATTGAGTTTGTAGATGTCACTGCACAGCTACCTGAACGTCTGACCAAAA
CTGAAAGTCTGGAAATTACAACTGGCTTCGAGTTTGTTCAAGGTGATGGTACTGAACCACCAAATATGATGGGTGAGTGG
GCTGAAAACACCTCAAGCGATAGCAGTAACGAGATGATCCGTATTTCAGCCGAACTGGTCGAGAAGATGATTGACCTGTC
AGGTGAAAATGCAATTAACCGTTCGCGTATCGAGATGGATCTGGGACAGCTCGGCAATACCTTAAATGAGATGGAACTGG
CGATCAAACGTCTGGCTGATCAGCTGCGCCGTATGGAAGGCGAGCTGGAATCTCAGATTATTGCCAAACATGGCTCAGAA
AACTCACGCTATGCTGACTTCGATCCGTTGGAGATGGACCAATATTCATCTCTGAACCAGTTATCTAAATCTCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAGACCACGTTGGCAGAAAAAATCCGTGATACCGAAGGTCTGCTATTGCAACAAT
CGCGTATCCAGGCTGAGATTCAGGAAAGTCTGATGCGTACCCGTCTGGTACCATTTGACCGTATGTTGCCACGTTTACAA
CGTATTGTGCGTCAAACTTCGACCACACTGAACCGTCCGGCAGAGCTGATTGTTCAGAATACCGAAGGTGAACTCGACCG
TACCATTCTGGAACGTCTGGTAAACCCATTCGAGCACATGCTACGTAACGCGATTGACCATGGTCTGGAAGATACTGCAG
AACGGCTTGCGCTGAATAAGCCAGAAGTCGGTTCAATTGTCTTGAACATTAGCCGTCAGGGTACCGATGTCATTATCTCC
TTTAGTGATGATGGTAAGGGGATTGATGCGGAGAGTATTCGAGCTAAAGCCATCAGCCTGGGCTTGATCAAAGCGGAACA
GCAGGTGGATCAGGAAGAATTGCTGCAATTCATCTTCCATCCAGGTTTCAGTACGGCTAAAGCAGTCACCCAGATTTCTG
GTCGAGGTGTTGGTCTGGACGTGGTACAAAGCGAAATCAAAACGCTGGGCGGTCACGTTTCGGTAAATTCTGAACTGGGC
AAAGGCACGACCTTTACGATTCGCGTACCGACCACTGTGGCAGTCAGTGATGCCTTAATGGTGAAAGCGGGTGACCAGCA
ATTTGCTATTTCCCTGGCACAGATTGATCGTATTGTCCGTATTGCACCAGCAACACTGGAAACTTACTTCAACAGTAAGG
ATGATTACTTCAAGATTGATGGTGTGAACTACAAGCTGCGCTATCTGTCTGAGTTTGTCTCTAATCAGCCAATTCCACGT
TTGAATAATGTCGCACATTCATTACCAGTACTCCTCATCAAGGGTAATGGTGGTCAAAGTATCGCTTTGCTGGTGGATCA
ATTAGTTGGCTCACGTGCACAGATCGTAGTGAAACCGATTGGACAGCAGTTTGCCAGTGTGGGTGTGATTGCAGGGGCAA
CCATTCTTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCTCGTCAGGTTCAGGCGACTCAGCGTATC
AAACAGTTATCTGATCAGCAGGATCTGTCACGTCGTGGTAATGCACGTCGTCTGGTCATGATTGTCGATGACTCGGTAAC
TGTACGTAAGGTAACGTCACGTCTGTTAGAGCGTCAGGGTTATGATATTGTCACTGCCAAAGATGGTGTCGACGCGATTG
AACAGCTGGAAAATGTCCGTCCAGACCTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAATTAAC
CTGGTTCGCCATCATGATATTCACCGCAACTTGCCAATTATCATGATCACCTCACGTACTGGGGAGAAGCATCGTGAGCG
TGCCTTCAGTCTGGGTGTGACACACTATATGGGTAAACCGTTCCAGGAAGCGGAGCTGCTTGCCAATGTTCAAGAATTAA
TTGCTGCTCAACAGGGGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1379-1490)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1076-1211)

Hpt domain (Hpt)

(25-103)

Hpt domain (Hpt)

(209-283)

Hpt domain (Hpt)

(729-793)

Hpt domain (Hpt)

(518-604)

CheW-like domain (CheW)

(1218-1354)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.654

100

0.619

Multiple sequence alignment